RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TRIM36Q9NQ86 728 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 CBLN4Q9NTU7 201 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 ACOXLQ9NUZ1 547 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 PTTG3PQ9NZH4 202 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 CGGBP1Q9UFW8 167 aaPredicted RBP6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 FBXO9Q9UK97 447 aaPredicted RBP6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 EDARQ9UNE0 448 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 GTF2A1LQ9UNN4 478 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 ERGIC3Q9Y282 383 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 STARD10Q9Y365 291 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 SNX5Q9Y5X3 404 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 APCP25054 2843 aa6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 YLPM1P49750 1951 aaKnown RBP6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 PRRC2AP48634 2157 aaKnown RBP6.51□□□□□ -1.37
HMGXB3-204ENST00000513318 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 FBN2P35556 2912 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 A6NHS1 94 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TNFAIP8O95379 198 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 IGLV3-1P01715 115 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TTRP02766 147 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 MT-ND2P03891 347 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 UBCP0CG48 685 aaKnown RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 PRF1P14222 555 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SELEP16581 610 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 KITLGP21583 273 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ANOS1P23352 680 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SERPINF1P36955 418 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 MPV17P39210 176 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 PSMB10P40306 273 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TGM4P49221 684 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 GBX2P52951 348 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 WNT4P56705 351 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TAS2R43P59537 309 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SNRPD2P62316 118 aaKnown RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ZNF92Q03936 586 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 GK2Q14410 553 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TBCEQ15813 527 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 MOGQ16653 247 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 GFOD2Q3B7J2 385 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 KCTD21Q4G0X4 260 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 CCDC58Q4VC31 144 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 WDR38Q5JTN6 314 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 GLYATL3Q5SZD4 288 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 OR2G6Q5TZ20 316 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 C11orf71Q6IPW1 123 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 FDX2Q6P4F2 183 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 PAMR1Q6UXH9 720 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 PGAP1Q75T13 922 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 CATSPERDQ86XM0 798 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ELMOD2Q8IZ81 293 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 NANOGP1Q8N7R0 232 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 OR2AE1Q8NHA4 323 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SPRYD4Q8WW59 207 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SGCDQ92629 289 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ITFG2Q969R8 447 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 REEP6Q96HR9 211 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 CCL19Q99731 98 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 TRAF4Q9BUZ4 470 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 MND1Q9BWT6 205 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 PBOV1Q9GZY1 135 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 POFUT1Q9H488 388 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 ISG20L2Q9H9L3 353 aaKnown RBP6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 G6PC2Q9NQR9 355 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 CLEC2DQ9UHP7 191 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 GPR160Q9UJ42 338 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 OR52A1Q9UKL2 312 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 FZR1Q9UM11 496 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 N6AMT1Q9Y5N5 214 aa6.5□□□□□ -1.37
HMGXB3-204ENST00000513318 hCG_38984A0A1B0GV85 526 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 A0A1W2PPW3 197 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 PLSCR5A0PG75 271 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 C5orf63A6NC05 138 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 TRIM64A6NGJ6 449 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 TMEM212A6NML5 194 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 M0R233 179 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 TIMM8AO60220 97 aaPredicted RBP6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 MTRF1O75570 445 aaKnown RBP6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 CLPTM1O96005 669 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 RAF1P04049 648 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 SOD3P08294 240 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 RPSAP08865 295 aaKnown RBP6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 ATP6V1B1P15313 513 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 CCL1P22362 96 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 LIPAP38571 399 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 DDOSTP39656 456 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 PPOXP50336 477 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 CCR9P51686 369 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 CHN2P52757 468 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 KRTAP10-9P60411 292 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 BDH1Q02338 343 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 PSG7Q13046 419 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 ALKBH1Q13686 389 aaKnown RBP6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 IRF3Q14653 427 aa6.49□□□□□ -1.37
HMGXB3-204ENST00000513318 HLXQ14774 488 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms