RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR4S1Q8NGB4 309 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 OR4C16Q8NGL9 310 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 SULT1B1O43704 296 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 SSNA1O43805 119 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 LCATP04180 440 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 VSIG8P0DPA2 414 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 MRPS34P82930 218 aaKnown RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 DYRK1AQ13627 763 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.32
PHF3-209ENST00000509330 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 OR5AS1Q8N127 324 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 SLC22A24Q8N4F4 322 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 PAQR4Q8N4S7 273 aaPredicted RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 MOB1AQ9H8S9 216 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 ELL3Q9HB65 397 aaPredicted RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 PIGLQ9Y2B2 252 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 CYTIPO60759 359 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 MPIG6BO95866 241 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 FAM27BQ5VT28 67 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 HACD4Q5VWC8 232 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 ZNF782Q6ZMW2 699 aaPredicted RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 NKAIN3Q8N8D7 197 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 NUDCD2Q8WVJ2 157 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 GPR35Q9HC97 309 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
PHF3-209ENST00000509330 DMXL2Q8TDJ6 3036 aa13.04□□□□□ -0.32
PHF3-209ENST00000509330 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 HPNP05981 417 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 GNB3P16520 340 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 SPINK2P20155 84 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 RAD52P43351 418 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 AP3S2P59780 193 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 ZNF766Q5HY98 468 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 DOK3Q7L591 496 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OR14K1Q8NGZ2 314 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 DNPH1O43598 174 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 NME2P1O60361 137 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 SYNGR4O95473 234 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 CD46P15529 392 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 PSMB1P20618 241 aaKnown RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 NME2P22392 152 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 UBE2MP61081 183 aaKnown RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 SNRPD2P62316 118 aaKnown RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 PSG4Q00888 419 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 GSG1Q2KHT4 349 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 Q6ZTK2 550 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 BATF2Q8N1L9 274 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OR51S1Q8NGJ8 323 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OR52B4Q8NGK2 314 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 OR51J1Q9H342 316 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 NOX3Q9HBY0 568 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 GPR173Q9NS66 373 aa13.03□□□□□ -0.32
PHF3-209ENST00000509330 MRPS28Q9Y2Q9 187 aaKnown RBP13.03□□□□□ -0.32
PHF3-209ENST00000509330 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 H7C417 338 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 RLN1P04808 185 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 NKPD1Q17RQ9 610 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 BTN2A1Q7KYR7 527 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 C1QL2Q7Z5L3 287 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 GLRX5Q86SX6 157 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 LYPD6Q86Y78 171 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 SPTSSAQ969W0 71 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.32
PHF3-209ENST00000509330 MTFP1Q9UDX5 166 aa13.02□□□□□ -0.32
PHF3-209ENST00000509330 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.32
PHF3-209ENST00000509330 CDRT15L2A8MXV6 281 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 HLA-HP01893 362 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 ZNF708P17019 499 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 FGD2Q7Z6J4 655 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 SEH1LQ96EE3 360 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 SCMH1Q96GD3 660 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 GHITMQ9H3K2 345 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 LOC390937A0A1W2PQ73 354 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 CRTAPO75718 401 aaPredicted RBP13.02□□□□□ -0.33
PHF3-209ENST00000509330 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 ACKR3P25106 362 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 FAPQ12884 760 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 DEFB109BQ30KR1 87 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 OR52W1Q6IF63 320 aa13.02□□□□□ -0.33
PHF3-209ENST00000509330 NOXA1Q86UR1 476 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms