RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SURF2Q15527 256 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 UBE2V2Q15819 145 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 RAB11BQ15907 218 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 GUK1Q16774 197 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ISXQ2M1V0 245 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SCGB2B2Q4G0G5 96 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ACTBL2Q562R1 376 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 XKR4Q5GH76 650 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM69Q5SWH9 247 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 MARC1Q5VT66 337 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 REEP3Q6NUK4 255 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ACSM5Q6NUN0 579 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 GDPD4Q6W3E5 623 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 Q6ZPB1 254 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 LANCL3Q6ZV70 420 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC36A1Q7Z2H8 476 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SZRD1Q7Z422 152 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 RELL2Q8NC24 303 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 PLPP5Q8NEB5 264 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 OR8G5Q8NG78 346 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 OR51G2Q8NGK0 314 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 OR51F2Q8NH61 342 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 OR5AK2Q8NH90 309 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 C16orf78Q8WTQ4 265 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TRAPPC12Q8WVT3 735 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 HMGB4Q8WW32 186 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 METTL21AQ8WXB1 218 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ASB17Q8WXJ9 295 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TM4SF18Q96CE8 201 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SMIM12Q96EX1 92 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 LINGO1Q96FE5 620 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ACY3Q96HD9 319 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 F2RL3Q96RI0 385 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC22A12Q96S37 553 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 PHB2Q99623 299 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ANGPTL4Q9BY76 406 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 WWTR1Q9GZV5 400 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF350Q9GZX5 532 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SRMSQ9H3Y6 488 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 RIMS4Q9H426 269 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 RERGLQ9H628 205 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ASB8Q9H765 288 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TRPV4Q9HBA0 871 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 APMAPQ9HDC9 416 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 MYNNQ9NPC7 610 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ADAP2Q9NPF8 381 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 IL26Q9NPH9 171 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 KCNJ16Q9NPI9 418 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC17A5Q9NRA2 495 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 CA10Q9NS85 328 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 FAM212BQ9NTI7 297 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 LYRM2Q9NU23 88 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM242Q9NWH2 141 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 TVP23BQ9NYZ1 205 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 DOK5Q9P104 306 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF225Q9UK10 706 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 MOKQ9UQ07 419 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 ZFP30Q9Y2G7 519 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 MEMO1Q9Y316 297 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 MRPS18CQ9Y3D5 142 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 STRAPQ9Y3F4 350 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 PCDHGA1Q9Y5H4 931 aa4.03□□□□□ -1.76
PDLIM5-211ENST00000508531 COL11A1P12107 1806 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF292O60281 2723 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 YLPM1P49750 1951 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 TRIP11Q15643 1979 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 FRYLO94915 3013 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 TRBV6-7A0A0A0MS04 114 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 A0A0A6YYH2 397 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 C1orf226A1L170 272 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 A6NJ64 397 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 RNF212BA8MTL3 300 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF724A8MTY0 619 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 IDSB3KWA1 339 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 PRRG1O14668 218 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 SCAMP2O15127 329 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC16A5O15375 505 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 CLDN11O75508 207 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 GLCEO94923 617 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 SLCO2B1O94956 709 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 GJB5O95377 273 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 DIRAS3O95661 229 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 FGF19O95750 216 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 IGF2P01344 180 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 TRBC1P01850 177 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 TK1P04183 234 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 GAPDHP04406 335 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 CTSLP07711 333 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 GTF2F2P13984 249 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 TBPP20226 339 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 MSR1P21757 451 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 ELAVL4P26378 380 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 CD82P27701 267 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 CD34P28906 385 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 SNCAP37840 140 aa4.02□□□□□ -1.77
PDLIM5-211ENST00000508531 CD200P41217 278 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 264.1 ms