RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ATXN7L3Q14CW9 347 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CT83Q5H943 113 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SIAH3Q8IW03 269 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FAM58AQ8N1B3 248 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CD300LFQ8TDQ1 290 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GPR148Q8TDV2 347 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 C10orf82Q8WW14 230 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 WNT2BQ93097 391 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RNF125Q96EQ8 232 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF764Q96H86 408 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GRAMD2BQ96HH9 432 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 VKORC1Q9BQB6 163 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF649Q9BS31 505 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 NMES1Q9C002 83 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FXYD6Q9H0Q3 95 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MYOZ1Q9NP98 299 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR2S2Q9NQN1 319 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FBXL17Q9UF56 701 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CHRNA9Q9UGM1 479 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 HHLA2Q9UM44 414 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PIGLQ9Y2B2 252 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TEX264Q9Y6I9 313 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 A0A1W2PNR3 127 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RHBDL1O75783 438 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GPANK1O95872 356 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 S100A8P05109 93 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 UCHL1P09936 223 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CLEC2LP0C7M8 214 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PGGT1BP53609 377 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 WNT3P56703 355 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RHOBP62745 196 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF124Q15973 351 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF658BQ4V348 819 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RABL3Q5HYI8 236 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 NPSR1Q6W5P4 371 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CEACAM19Q7Z692 300 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CBR4Q8N4T8 237 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35G3Q8N808 338 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ACBD4Q8NC06 268 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35B2Q8TB61 432 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FAM222BQ8WU58 562 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MRPL13Q9BYD1 178 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 METTL9Q9H1A3 318 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF286AQ9HBT8 521 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SMCO4Q9NRQ5 59 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TAS2R8Q9NYW2 309 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 C1RLQ9NZP8 487 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 THYN1Q9P016 225 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OSGIN1Q9UJX0 560 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF225Q9UK10 706 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 IER3IP1Q9Y5U9 82 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 A0A0U1RQK1 487 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IGHG3P01860 377 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR4A8P0C604 315 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NPPBP16860 134 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 APEX1P27695 318 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SRD5A2P31213 254 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 KLF3P57682 345 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TAS2R30P59541 319 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DNAJB13P59910 316 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ACTBP60709 375 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 UFM1P61960 85 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35B1P78383 322 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 GPR50Q13585 617 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 KCNMB1Q16558 191 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM205Q6UW68 189 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SEZ6L2Q6UXD5 910 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SYNPRQ8TBG9 265 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MAL2Q969L2 176 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 UTP4Q969X6 686 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 FGGYQ96C11 551 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MRPS24Q96EL2 167 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM80Q96HE8 168 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NOL4LQ96MY1 436 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 COMMD5Q9GZQ3 224 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 RIMS3Q9UJD0 308 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DAPP1Q9UN19 280 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ATG4BQ9Y4P1 393 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 LOC100289279A0A1B0GTE1 492 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF320A2RRD8 509 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 AGAP5A6NIR3 686 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 RAB27BO00194 218 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 GAPDHSO14556 408 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SH2D1BO14796 132 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 WIPF1O43516 503 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CYTIPO60759 359 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PPP1R3DO95685 299 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ARG1P05089 322 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SDC1P18827 310 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IVDP26440 423 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 LUMP51884 338 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TAS2R20P59543 309 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 APOFQ13790 326 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MICBQ29980 383 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CEACAM21Q3KPI0 293 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NRN1LQ496H8 165 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF628Q5EBL2 1059 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TECRLQ5HYJ1 363 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SLC48A1Q6P1K1 146 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PRSS41Q7RTY9 318 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms