RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SSX6Q7RTT6 188 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 ABHD12BQ7Z5M8 362 aaPredicted RBP2.81□□□□□ -1.96
DHFR-204ENST00000508282 RALGPS2Q86X27 583 aaPredicted RBP2.81□□□□□ -1.96
DHFR-204ENST00000508282 SAXO1Q8IYX7 474 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 ZFP41Q8N8Y5 198 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 CHST4Q8NCG5 386 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 CCDC54Q8NEL0 328 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 OR7G1Q8NGA0 311 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 OR10G9Q8NGN4 311 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 OR51A7Q8NH64 312 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 TMEM158Q8WZ71 300 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 LRRC45Q96CN5 670 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 SERPINB11Q96P15 392 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 CIB1Q99828 191 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 OR11A1Q9GZK7 315 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 C1orf198Q9H425 327 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 CLMPQ9H6B4 373 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 REEP1Q9H902 201 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 VAPAQ9P0L0 249 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 CEMIPQ8WUJ3 1361 aa2.81□□□□□ -1.96
DHFR-204ENST00000508282 LRPPRCP42704 1394 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 TRAV8-7A0A075B6U6 113 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 A0A0A6YYD5 115 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 A0A0G2JN53 185 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 SYCE1LA8MT33 242 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ANKRD65E5RJM6 399 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 F8VP50 259 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 DFFAO00273 331 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 TOR1AO14656 332 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 GATCO43716 136 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 CDC40O60508 579 aaKnown RBP eCLIP2.8□□□□□ -1.96
DHFR-204ENST00000508282 SLC16A7O60669 478 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 SCN2BO60939 215 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ALOX12BO75342 701 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RDH16O75452 317 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RAB3DO95716 219 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 GCGP01275 180 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 EIF4EP06730 217 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 ATF6P18850 670 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RAB3BP20337 219 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 WARSP23381 471 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 FGF8P55075 233 aaPredicted RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 UBE2KP61086 200 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RPL31P62899 125 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 THEM4Q5T1C6 240 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 FAHD1Q6P587 224 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 CD300LGQ6UXG3 332 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 TEX43Q6ZNM6 134 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ABHD13Q7L211 337 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ARRDC1Q8N5I2 433 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 CDRT4Q8N9R6 151 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 CYB561A3Q8NBI2 242 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 OR5AR1Q8NGP9 310 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 OR10J6PQ8NGY7 276 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ZFP90Q8TF47 636 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 ZFP3Q96NJ6 502 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 UQCC2Q9BRT2 126 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 CHRNA10Q9GZZ6 450 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 CCL28Q9NRJ3 127 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RMND1Q9NWS8 449 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 SDHAF2Q9NX18 166 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 RBAKQ9NYW8 714 aaPredicted RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 CES1P1Q9UKY3 287 aa2.8□□□□□ -1.96
DHFR-204ENST00000508282 MRPS18BQ9Y676 258 aaKnown RBP2.8□□□□□ -1.96
DHFR-204ENST00000508282 CIB4A0PJX0 185 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 K7EN84 100 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 hCG_2039718K7EN88 272 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 KMOO15229 486 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 NIPSNAP2O75323 286 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 SLC25A27O95847 323 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 RETP07949 1114 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 SMIM10L1P0DMW3 83 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 IGHV3-43DP0DP04 118 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 IGFBP3P17936 291 aaPredicted RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 GABRG2P18507 467 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 PGAM1P18669 254 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 CD40LGP29965 261 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 MAS1LP35410 378 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 UGT2B10P36537 528 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 RBM34P42696 430 aaKnown RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 PRLHRP49683 370 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 HCCSP53701 268 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 RPL18AQ02543 176 aaKnown RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 C2orf80Q0P641 193 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 ZNF266Q14584 549 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 SGCAQ16586 387 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 RFX4Q33E94 735 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 C5orf47Q569G3 176 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 LINC00173Q6ZV60 143 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 SETD3Q86TU7 594 aaPredicted RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 MCOLN3Q8TDD5 553 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 LRRC29Q8WV35 223 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 AURKBQ96GD4 344 aaPredicted RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 SMIM10Q96HG1 83 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 ZNF681Q96N22 645 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 ZNF396Q96N95 335 aaPredicted RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 UPF3BQ9BZI7 483 aaKnown RBP2.79□□□□□ -1.96
DHFR-204ENST00000508282 C6orf50Q9HD87 102 aa2.79□□□□□ -1.96
DHFR-204ENST00000508282 EURLQ9NYK6 297 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms