RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 Q6ZRG5 221 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 YRDCQ86U90 279 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 OR6K2Q8NGY2 324 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 DYRK2Q92630 601 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 TMEM169Q96HH4 297 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 C12orf42Q96LP6 360 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 ABHD14AQ9BUJ0 271 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 NMES1Q9C002 83 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 SLC5A7Q9GZV3 580 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CHST8Q9H2A9 424 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 FBRSQ9HAH7 460 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 ABI3Q9P2A4 366 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 PTGFRNQ9P2B2 879 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 PCTPQ9UKL6 214 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 PLXND1Q9Y4D7 1925 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 SMIM35A0A1B0GVV1 85 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 RAB27BO00194 218 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 XKRYO14609 159 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 ATXN7O15265 892 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 PCDH7O60245 1069 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 TBX6O95947 436 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 ESDP10768 282 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 ARL3P36405 182 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 THPOP40225 353 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CTRLP40313 264 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 BCL6P41182 706 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 PPICP45877 212 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 SCAND1P57086 179 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 PAFAH1B3Q15102 231 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 DUSP5Q16690 384 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CTSL3PQ5NE16 218 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 FIGLAQ6QHK4 219 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 IZUMO1Q8IYV9 350 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 TCEANCQ8N8B7 351 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 ASB10Q8WXI3 467 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 SMPDL3BQ92485 455 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 KTI12Q96EK9 354 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CD180Q99467 661 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CTDSP1Q9GZU7 261 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 P2RY12Q9H244 342 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 KCPQ6ZWJ8 1503 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 SBF1O95248 1867 aa9.66□□□□□ -0.86
PDLIM5-210ENST00000508216 FAM166BA8MTA8 275 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 FTCDNL1E5RQL4 147 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 GAPDHSO14556 408 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 GEMIN2O14893 280 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 ZNF354AO60765 605 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 ALOX12BO75342 701 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 IL2RAP01589 272 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 H1F0P07305 194 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 CTSBP07858 339 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 DPP4P27487 766 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 MTNR1AP48039 350 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 P2RX1P51575 399 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 PGGT1BP53609 377 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 ATP1B3P54709 279 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 TAS2R43P59537 309 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 SCAPQ12770 1279 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 FOXF1Q12946 379 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 CTBP1Q13363 440 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 GPNMBQ14956 572 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 TAF13Q15543 124 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 ELOA3BQ3SY89 546 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 COX19Q49B96 90 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 CCSMST1Q4G0I0 132 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 SLC16A11Q8NCK7 471 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 ELOA3Q8NG57 546 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 OR4K14Q8NGD5 310 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 OR10G4Q8NGN3 311 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 HIST1H2AAQ96QV6 131 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 TBL1YQ9BQ87 522 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 MTFP1Q9UDX5 166 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 IL36AQ9UHA7 158 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 WIPI2Q9Y4P8 454 aa9.65□□□□□ -0.86
PDLIM5-210ENST00000508216 FITM1A5D6W6 292 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 CLDN34H7C241 214 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 LEFTY2O00292 366 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 EIF1AYO14602 144 aaKnown RBP9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 FCMRO60667 390 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 PPP1R11O60927 126 aaPredicted RBP9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 EIF1AXP47813 144 aaKnown RBP9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 CSNK1A1P48729 337 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 CX3CR1P49238 355 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 SRPXP78539 464 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 MMDQ15546 238 aa9.65□□□□□ -0.87
PDLIM5-210ENST00000508216 ARHGAP11BQ3KRB8 267 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms