RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	RAB9A	P51151	201 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RAB10	P61026	200 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	UBE2K	P61086	200 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	UBE2N	P61088	152 aa	Known RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ST8SIA6	P61647	398 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	PAFAH1B2	P68402	229 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CRADD	P78560	199 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	AES	Q08117	197 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RAB40B	Q12829	278 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	TNFAIP1	Q13829	316 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	FZD2	Q14332	565 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RBM39	Q14498	530 aa	Known RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SNRNP35	Q16560	246 aa	Known RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF789	Q5FWF6	425 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	PHYHD1	Q5SRE7	291 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	C1orf189	Q5VU69	101 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ADNP2	Q6IQ32	1131 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GJB7	Q6PEY0	223 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	LCTL	Q6UWM7	567 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GTF2H5	Q6ZYL4	71 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	COX15	Q7KZN9	410 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SLC36A1	Q7Z2H8	476 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ACOT1	Q86TX2	421 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	AMZ2	Q86W34	360 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	LINC00346	Q8IVM7	164 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SIAH3	Q8IW03	269 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CMTM8	Q8IZV2	173 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	LGI3	Q8N145	548 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	BEST3	Q8N1M1	668 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CFAP52	Q8N1V2	620 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GALNT16	Q8N428	558 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	LINC00471	Q8N535	108 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	FAM71E2	Q8N5Q1	922 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	TCEANC	Q8N8B7	351 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	COX18	Q8N8Q8	333 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CYB561A3	Q8NBI2	242 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RELL2	Q8NC24	303 aa	Predicted RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SLC26A10	Q8NG04	563 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR11G2	Q8NGC1	345 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR8J1	Q8NGP2	316 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR51Q1	Q8NH59	317 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SFXN5	Q8TD22	340 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	LRRC15	Q8TF66	581 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SDR42E1	Q8WUS8	393 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	TNFAIP8L1	Q8WVP5	186 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GPR146	Q96CH1	333 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	MS4A6E	Q96DS6	147 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	PIK3IP1	Q96FE7	263 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	HARBI1	Q96MB7	349 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GPR78	Q96P69	363 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ATOH8	Q96SQ7	321 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CITED1	Q99966	193 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	HINT2	Q9BX68	163 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SLC17A9	Q9BYT1	436 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CHIA	Q9BZP6	476 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CIPC	Q9C0C6	399 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR11A1	Q9GZK7	315 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SLC35B3	Q9H1N7	401 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ELL3	Q9HB65	397 aa	Predicted RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	ASIC5	Q9NY37	505 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	FKBP11	Q9NYL4	201 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	GPR83	Q9NYM4	423 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CD84	Q9UIB8	345 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RAB22A	Q9UL26	194 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	CORO2B	Q9UQ03	480 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	RAI2	Q9Y5P3	530 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	KAT6A	Q92794	2004 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	BTAF1	O14981	1849 aa		4.56	□□□□□ -1.68
TUSC3-205	ENST00000507316	STRCP1	A6NGW2	1772 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	EVPL	Q92817	2033 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	TRBV6-7	A0A0A0MS04	114 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	IGHV1-69-2	A0A0G2JMI3	117 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	GXYLT2	A0PJZ3	443 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	FBLL1	A6NHQ2	334 aa	Known RBP	4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	C3orf70	A6NLC5	250 aa	Predicted RBP	4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	VSTM2B	A6NLU5	285 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	TISP43	B9A030	160 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316		B9A039	149 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	FAM157A	C9JC47	383 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316		G3V3Y1	287 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	PEX12	O00623	359 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	AZIN1	O14977	448 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	HCRTR1	O43613	425 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	PLPP2	O43688	288 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR1F1	O43749	312 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	CS	O75390	466 aa	Known RBP	4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	CLDN11	O75508	207 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	SCGB2A1	O75556	95 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	C1QL1	O75973	258 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	RCBTB2	O95199	551 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	C1R	P00736	705 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	TYMS	P04818	313 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	MMP7	P09237	267 aa	Predicted RBP	4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	ESD	P10768	282 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	LIPC	P11150	499 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	LAMP1	P11279	417 aa		4.55	□□□□□ -1.68
TUSC3-205	ENST00000507316	HOXB2	P14652	356 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms