RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TEKT3Q9BXF9 490 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 RRAGDQ9NQL2 400 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 PDP1Q9P0J1 537 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 TMEM120BA0PK00 339 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 CACNG3O60359 315 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 DNAJB6O75190 326 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 OXTP01178 125 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 GABRG2P18507 467 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 RAB9AP51151 201 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 FABP6P51161 128 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 ITIH4Q14624 930 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF829Q3KNS6 432 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 SLC25A35Q3KQZ1 300 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 MDP1Q86V88 176 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 SPANXA2-OT1Q8N9U9 137 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 OR5AR1Q8NGP9 310 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 OR52E5Q8NH55 327 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 SGTBQ96EQ0 304 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 PIGUQ9H490 435 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF442Q9H7R0 627 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 RGS18Q9NS28 235 aa2.03□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF98A6NK75 572 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 TAAR5O14804 337 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 BCKDKO14874 412 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 CHMP2AO43633 222 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 PLIN3O60664 434 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 FCN3O75636 299 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 HLA-HP01893 362 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 IFNW1P05000 195 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 MYL9P24844 172 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 HTR1DP28221 377 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 PFN2P35080 140 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 GGT2P36268 569 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 MYCNOSP40205 109 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 TNFSF9P41273 254 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 RPS15AP62244 130 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 DMC1Q14565 340 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 STUMQ69YW2 141 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 GUSBP11Q6P575 273 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 OPN5Q6U736 354 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 CALHM3Q86XJ0 350 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 SLC35G3Q8N808 338 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 UBAC2Q8NBM4 344 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 APCDD1LQ8NCL9 501 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 OR10W1Q8NGF6 305 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 RAB1CQ92928 201 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 CPNE4Q96A23 557 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 WDR34Q96EX3 536 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 IP6K3Q96PC2 410 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 CALN1Q9BXU9 219 aa2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 ZSCAN16Q9H4T2 348 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 DHX35Q9H5Z1 703 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-204ENST00000505804 IGHV3OR16-8A0A075B7F1 116 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 IGHV1-3A0A0C4DH29 117 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 RAD1O60671 282 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 TGM6O95932 706 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 MT-ND4P03905 459 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 GLAP06280 429 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 IGKV4-1P06312 121 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 PSMB5P28074 263 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 PPICP45877 212 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 GDI2P50395 445 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 CD300LGQ6UXG3 332 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 RTL4Q6ZR62 310 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 OFCC1Q8IZS5 231 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 VKORC1L1Q8N0U8 176 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 C19orf18Q8NEA5 215 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 BPIFCQ8NFQ6 507 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 OR1P1Q8NH06 330 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 OR51F2Q8NH61 342 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 RXFP4Q8TDU9 374 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 RERGQ96A58 199 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 OR4K3Q96R72 315 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 CHCHD7Q9BUK0 85 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 ELOVL6Q9H5J4 265 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 DHCR7Q9UBM7 475 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 FARSAQ9Y285 508 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 TRIP11Q15643 1979 aa2.01□□□□□ -2.09
TOPBP1-204ENST00000505804 MROH7Q68CQ1 1323 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 A0A1B0GUH1 482 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 SERTM2A0A1B0GWG4 89 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 ANKRD65E5RJM6 399 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 WRBO00258 174 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 SLC19A2O60779 497 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 RPN2P04844 631 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 KRT16P08779 473 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 UBCP0CG48 685 aaKnown RBP2□□□□□ -2.09
TOPBP1-204ENST00000505804 UBE2E1P51965 193 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 CMC4P56277 68 aaPredicted RBP2□□□□□ -2.09
TOPBP1-204ENST00000505804 RBX1P62877 108 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 IGFBP7Q16270 282 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 RHOXF2Q9BQY4 288 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 NUDT9Q9BW91 350 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 TOLLIPQ9H0E2 274 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 EXO5Q9H790 373 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 DCAF16Q9NXF7 216 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 TBC1D24Q9ULP9 559 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 HES2Q9Y543 173 aa2□□□□□ -2.09
TOPBP1-204ENST00000505804 SAR1BQ9Y6B6 198 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms