RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PPP1R42Q7Z4L9 355 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 UBE2J2Q8N2K1 259 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 C19orf18Q8NEA5 215 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR6Q1Q8NGQ2 317 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 KCNG3Q8TAE7 436 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 RXFP4Q8TDU9 374 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 IGF2BP2-AS1Q96M15 143 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR4K3Q96R72 315 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 CRACR2AQ9BSW2 395 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 ILKAPQ9H0C8 392 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 DSN1Q9H410 356 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 RETNQ9HD89 108 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 DYRK4Q9NR20 520 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 NLE1Q9NVX2 485 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 CCDC59Q9P031 241 aaKnown RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 CLOCKO15516 846 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR2J3O76001 311 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 NELFEP18615 380 aaKnown RBP1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC1A1P43005 524 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 SELENBP1Q13228 472 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 DDX39BQ13838 428 aaKnown RBP1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF141Q15928 474 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF660Q6AZW8 331 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 AMMECR1LQ6DCA0 310 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 CMC1Q7Z7K0 106 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR9K2Q8NGE7 335 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR4C13Q8NGP0 309 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 CMTM2Q8TAZ6 248 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 HAUS1Q96CS2 278 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 KCNS3Q9BQ31 491 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF649Q9BS31 505 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 METTL7AQ9H8H3 244 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 PLEKHF2Q9H8W4 249 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 RRAGDQ9NQL2 400 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZBED9Q6R2W3 1325 aa1.05□□□□□ -2.24
HMGB1P29-201ENST00000505659 KIAA1671Q9BY89 1806 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 IGHV3OR16-9A0A0B4J2B5 98 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 EIF3HO15372 352 aaKnown RBP eCLIP1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 AQP9O43315 295 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 PGA5P0DJD9 388 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC2A3P11169 496 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF24P17028 368 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 TAGLN2P37802 199 aaKnown RBP1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 TGM4P49221 684 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 RAB7AP51149 207 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 BIKQ13323 160 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 TRAM2Q15035 370 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZMYND11Q15326 602 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 GCSAMLQ5JQS6 135 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 TPTE2P1Q5T6R2 138 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 C9orf135Q5VTT2 229 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF470Q6ECI4 717 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 APOBEC3HQ6NTF7 200 aaKnown RBP1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 REEP3Q6NUK4 255 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 CASC1Q6TDU7 716 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 RGS9BPQ6ZS82 235 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 DRAM1Q8N682 238 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC26A10Q8NG04 563 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR52N1Q8NH53 320 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 DUSP21Q9H596 190 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 BEX1Q9HBH7 125 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZNF302Q9NR11 478 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 RGS18Q9NS28 235 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC39A1Q9NY26 324 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 MCTS1Q9ULC4 181 aaKnown RBP1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 FHOD3Q2V2M9 1422 aa1.04□□□□□ -2.24
HMGB1P29-201ENST00000505659 C15orf65H3BRN8 121 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 M0R1X1 148 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 FGFR1OPO95684 399 aaKnown RBP1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 PRB1P04280 392 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 MMP7P09237 267 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 PGA4P0DJD7 388 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 PGA3P0DJD8 388 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 HLA-DMAP28067 261 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 GGT2P36268 569 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 PRPHP41219 470 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 KRTAP25-1Q3LHN0 102 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 ANKDD1AQ495B1 522 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 HSP90AB3PQ58FF7 597 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 LIN9Q5TKA1 542 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZFAND6Q6FIF0 208 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 CD300LGQ6UXG3 332 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC16A14Q7RTX9 510 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 BBS7Q8IWZ6 715 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 ACTL9Q8TC94 416 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 ACMSDQ8TDX5 336 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 CDS1Q92903 461 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 CSPG4P5Q96PW8 444 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR2V2Q96R30 315 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 UQCC2Q9BRT2 126 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 NT5C3AQ9H0P0 336 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 TMEM38AQ9H6F2 299 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 AGPAT4Q9NRZ5 378 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 MTCH1Q9NZJ7 389 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 EXTL2Q9UBQ6 330 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 HES2Q9Y543 173 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 ATAD2BQ9ULI0 1458 aa1.03□□□□□ -2.24
HMGB1P29-201ENST00000505659 CACNA1GO43497 2377 aa1.03□□□□□ -2.25
HMGB1P29-201ENST00000505659 SIRPB1O00241 398 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC9A3R1O14745 358 aaPredicted RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms