RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 A0A0U1RQV5 110 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 EFCAB10A6NFE3 127 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 IQCF6A8MYZ5 107 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 LOC110117498-PIK3R3F6TDL0 507 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 TBX1O43435 398 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 PNPP00491 289 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ADH4P08319 380 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 SELEP16581 610 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ATP5J2P56134 94 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ACTA2P62736 377 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ACTG2P63267 376 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 TIGD6Q17RP2 521 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ALKBH6Q3KRA9 238 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ZMAT1Q5H9K5 638 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 OR2T2Q6IF00 324 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 LHFPL3Q86UP9 236 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 SYS1Q8N2H4 156 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 BPIFB6Q8NFQ5 453 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 OR8B12Q8NGG6 310 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 OR2AE1Q8NHA4 323 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ITFG2Q969R8 447 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 SIGLEC11Q96RL6 698 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 VRK1Q99986 396 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ALG8Q9BVK2 526 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 PBOV1Q9GZY1 135 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 MOB1AQ9H8S9 216 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 BARX1Q9HBU1 254 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 NKIRAS2Q9NYR9 191 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 NUFIP1Q9UHK0 495 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 DIMT1Q9UNQ2 313 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 SNX5Q9Y5X3 404 aa10.16□□□□□ -0.78
PDLIM5-208ENST00000504489 ITPR3Q14573 2671 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 PLSCR5A0PG75 271 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 CD300LBA8K4G0 201 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 C17orf100A8MU93 164 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 DENRO43583 198 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 XPNPEP2O43895 674 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 NDUFS7O75251 213 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 RPP14O95059 124 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 IGHV4-39P01824 125 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ERCC1P07992 297 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 LIMS3P0CW19 117 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 LIMS4P0CW20 117 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 NAT2P11245 290 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 DDOSTP39656 456 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF81P51508 661 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 EFNA4P52798 201 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ART1P52961 327 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 OR12D2P58182 307 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 FAM3AP98173 230 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 MFGE8Q08431 387 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ST3GAL4Q11206 333 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 TP53I3Q53FA7 332 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 LCE2CQ5TA81 110 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 FDX2Q6P4F2 183 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 PRSS57Q6UWY2 283 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 FAM220AQ7Z4H9 259 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ELMOD2Q8IZ81 293 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 OR8G5Q8NG78 346 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 NEU4Q8WWR8 484 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 RORBQ92753 470 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 PELI1Q96FA3 418 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 PERPQ96FX8 193 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 REEP6Q96HR9 211 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 C4orf36Q96KX1 117 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 SORCS2Q96PQ0 1159 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 DIRC2Q96SL1 478 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 OCSTAMPQ9BR26 566 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 RHNO1Q9BSD3 238 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 Q9H521 79 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 G6PC2Q9NQR9 355 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 FKBP14Q9NWM8 211 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 SCN3BQ9NY72 215 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 OR52A1Q9UKL2 312 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 ZDHHC8Q9ULC8 765 aa10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 EXOSC1Q9Y3B2 195 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-208ENST00000504489 hCG_38984A0A1B0GV85 526 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 A0A1B0GWJ7 208 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 GGT3PA6NGU5 568 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 ZSCAN5BA6NJL1 495 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 J3QLW9 94 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 SLC1A7O00341 560 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 TTRP02766 147 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 CCDC159P0C7I6 412 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 ZNF19P17023 458 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 MYL12AP19105 171 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 ETV1P50549 477 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 MED21Q13503 144 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 PCGF3Q3KNV8 242 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 FAM209AQ5JX71 171 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 BCL2L15Q5TBC7 163 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 SHEQ5VZ18 495 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 Q6ZR03 302 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 CATSPERDQ86XM0 798 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms