RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 BCL2L15Q5TBC7 163 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 RDH10Q8IZV5 341 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 SYS1Q8N2H4 156 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 ZFP41Q8N8Y5 198 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 OR51E1Q8TCB6 317 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 FAM71F1Q96KD3 344 aaPredicted RBP11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 COG8Q96MW5 612 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 CACNG6Q9BXT2 260 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 SP140LQ9H930 580 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 MSL2Q9HCI7 577 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 FAIMQ9NVQ4 179 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 FRRS1LQ9P0K9 344 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 NUFIP1Q9UHK0 495 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 CAB39Q9Y376 341 aaPredicted RBP11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 SNX5Q9Y5X3 404 aa11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 SIRT4Q9Y6E7 314 aaPredicted RBP11.34□□□□□ -0.59
PDLIM7-212ENST00000504380 GGT3PA6NGU5 568 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 J3QW42 95 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 XRCC2O43543 280 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 RGS10O43665 173 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 NDUFS7O75251 213 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 MT-ND5P03915 603 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 GBX2P52951 348 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 SELENOVP59797 346 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 SNRPD2P62316 118 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 FAM3AP98173 230 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 TNK1Q13470 666 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 IRF3Q14653 427 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 NKPD1Q17RQ9 610 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 TMPRSS11AQ6ZMR5 421 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 Q6ZR03 302 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 PGAP1Q75T13 922 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 ELMOD2Q8IZ81 293 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 OR52H1Q8NGJ2 320 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 PPP1R3EQ9H7J1 279 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 GPR84Q9NQS5 396 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 ARFGEF3Q5TH69 2177 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
PDLIM7-212ENST00000504380 A0A1B0GTI1 187 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 PNMA8CA0A1B0GUJ8 204 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 hCG_38984A0A1B0GV85 526 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 ZSCAN5BA6NJL1 495 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 ACOD1A6NK06 481 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 CD300LBA8K4G0 201 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 H0YL77 283 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 H3BSA7 217 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 OVOL3O00110 214 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 MYL12BO14950 172 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 SPRY3O43610 288 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 LMX1BO60663 402 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 KITLGP21583 273 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 TUBG1P23258 451 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 GSK3AP49840 483 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 MMP15P51511 669 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 HNRNPA0Q13151 305 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 ALKBH1Q13686 389 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 SPRNQ5BIV9 151 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 OR10AC1Q8NH08 325 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 OR52N1Q8NH53 320 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 OR5M11Q96RB7 305 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 CDCA4Q9BXL8 241 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 TUBG2Q9NRH3 451 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
PDLIM7-212ENST00000504380 USF3Q68DE3 2245 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 F8P00451 2351 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 A6NIN4 97 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 IQCF6A8MYZ5 107 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 M0R233 179 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 LY6HO94772 140 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 DNASE1P24855 282 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 ACKR3P25106 362 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 RBMXP38159 391 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 MAGEB1P43366 347 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 EVX1P49640 407 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 ZNF81P51508 661 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 DVL3Q92997 716 aaPredicted RBP11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 PERPQ96FX8 193 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 SORCS2Q96PQ0 1159 aa11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 MYCBPQ99417 103 aaPredicted RBP11.31□□□□□ -0.6
PDLIM7-212ENST00000504380 MOB1AQ9H8S9 216 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms