RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 SNAP25P60880 206 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 MAB21L1Q13394 359 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 QPRTQ15274 297 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 IRF4Q15306 451 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 HSDL1Q3SXM5 330 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 ABCA11PQ4W5N1 156 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 XKR4Q5GH76 650 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 CERS6Q6ZMG9 384 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 NIPA1Q7RTP0 329 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 ASCL5Q7RTU5 278 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 FAM228AQ86W67 206 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 ZNF695Q8IW36 515 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 NTAN1Q96AB6 310 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 RASD2Q96D21 266 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 PKNOX2Q96KN3 472 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 ZNF578Q96N58 590 aaPredicted RBP1.89□□□□□ -2.11
GYPB-203ENST00000503255 RNF157Q96PX1 679 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 CHAC1Q9BUX1 264 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 SYNDIG1Q9H7V2 258 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 LSM7Q9UK45 103 aaKnown RBP1.89□□□□□ -2.11
GYPB-203ENST00000503255 KCNE3Q9Y6H6 103 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 KNL1Q8NG31 2342 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 SDK1Q7Z5N4 2213 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 MYH10P35580 1976 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 C2orf16Q68DN1 1984 aa1.89□□□□□ -2.11
GYPB-203ENST00000503255 CNOT1A5YKK6 2376 aaKnown RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 BPTFQ12830 3046 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 ANK1P16157 1881 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 TCHHQ07283 1943 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 COL4A6Q14031 1691 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 GLYATL1P3A0A0U1RQE8 302 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 ZNF816-ZNF321PA0A0X1KG74 233 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 GSTTP1A0A1W2PQM5 241 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 AIM2O14862 343 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 BCHEP06276 602 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 GNAO1P09471 354 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 ZNF43P17038 809 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 TCN2P20062 427 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 MAS1LP35410 378 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 PMELP40967 661 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 NAA10P41227 235 aaPredicted RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 NSG1P42857 185 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 CX3CR1P49238 355 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 STK11Q15831 433 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 FAM78AQ5JUQ0 283 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 DUX4L9Q6RFH8 374 aaPredicted RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 ZNF836Q6ZNA1 936 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 Q6ZR03 302 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 C15orf56Q8N910 161 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 OR1S2Q8NGQ3 325 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 OR2A1Q8NGT9 310 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 AKR7LQ8NHP1 331 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 SLC7A13Q8TCU3 470 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 TGS1Q96RS0 853 aaKnown RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 CAMK2N2Q96S95 79 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 ZNF382Q96SR6 550 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 ATP5SQ99766 215 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 CENPKQ9BS16 269 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 PSTPIP2Q9H939 334 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 KCNJ16Q9NPI9 418 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 DDX19AQ9NUU7 478 aaKnown RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 GPATCH2LQ9NWQ4 482 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 UXTQ9UBK9 157 aaPredicted RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 UBIAD1Q9Y5Z9 338 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 MRPS18BQ9Y676 258 aaKnown RBP1.88□□□□□ -2.11
GYPB-203ENST00000503255 FREM2Q5SZK8 3169 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 LAMA5O15230 3695 aa1.88□□□□□ -2.11
GYPB-203ENST00000503255 LRP4O75096 1905 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 MYOFQ9NZM1 2061 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 TPRP12270 2363 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 DSPP15924 2871 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 FAM47DPA6NHR8 397 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 LYRM9A8MSI8 78 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 ZNF705GA8MUZ8 300 aaPredicted RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 RAD51BO15315 384 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 DPM1O60762 260 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 CLPXO76031 633 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 SRP72O76094 671 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 CLIC3O95833 236 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 SMIM10L2AP0DMW4 78 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 SMIM10L2BP0DMW5 78 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 MUC1P15941 1255 aaPredicted RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 DTYMKP23919 212 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 GDI1P31150 447 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 HNRNPH3P31942 346 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 AQP2P41181 271 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 TMED10P49755 219 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 VSX2P58304 361 aaPredicted RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 ESRRGP62508 458 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 MGAT3Q09327 533 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 PDCD11Q14690 1871 aaKnown RBP1.87□□□□□ -2.11
GYPB-203ENST00000503255 ZSCAN26Q16670 478 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 COX19Q49B96 90 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 PTPN20Q4JDL3 420 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 XKR7Q5GH72 579 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 C9orf135Q5VTT2 229 aa1.87□□□□□ -2.11
GYPB-203ENST00000503255 ARL9Q6T311 187 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms