RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CLN8Q9UBY8 286 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 PILRBQ9UKJ0 227 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 EXO1Q9UQ84 846 aaKnown RBP5.83□□□□□ -1.48
CLCN3-203ENST00000502998 MEMO1Q9Y316 297 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 UFC1Q9Y3C8 167 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 PLXND1Q9Y4D7 1925 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 PLXNA4Q9HCM2 1894 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 PKD1L2Q7Z442 2459 aa5.83□□□□□ -1.48
CLCN3-203ENST00000502998 FNDC1Q4ZHG4 1894 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 KMT2EQ8IZD2 1858 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 A0A087WWC5 75 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 A0A1B0GTI1 187 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 NAP1L6A6NFF2 107 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 GGT3PA6NGU5 568 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CYB561D2O14569 222 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CSO75390 466 aaKnown RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 UPK3AO75631 287 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OR2C1O95371 312 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CDS2O95674 445 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OPN1SWP03999 348 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SFTA3P0C7M3 94 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 MPC1LP0DKB6 136 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 C8orf89P0DMQ9 161 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ST6GAL1P15907 406 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CD1CP29017 333 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 MIPP30301 263 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC6A6P31641 620 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SNCAP37840 140 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CTSOP43234 321 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 EIF1AXP47813 144 aaKnown RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 GABRA2P47869 451 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OR3A2P47893 321 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SOX2P48431 317 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SULT1A1P50225 295 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 MVDP53602 400 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC35A1P78382 337 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 MRPS34P82930 218 aaKnown RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 H3F3AP84243 136 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 IRF9Q00978 393 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ST3GAL3Q11203 375 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 PRDX4Q13162 271 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TMEM183BQ1AE95 376 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ZXDCQ2QGD7 858 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 AWAT1Q58HT5 328 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 KIAA1211LQ6NV74 962 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 DHRS11Q6UWP2 260 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC25A26Q70HW3 274 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OVCH1Q7RTY7 1134 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CPEB2Q7Z5Q1 589 aaKnown RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 C20orf196Q8IYI0 205 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 UBALD2Q8IYN6 164 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CFAP52Q8N1V2 620 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 PELI3Q8N2H9 469 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 PNPLA1Q8N8W4 532 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OR5AP2Q8NGF4 316 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 OR1P1Q8NH06 330 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC35B2Q8TB61 432 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 STYXQ8WUJ0 223 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 NUDCD2Q8WVJ2 157 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ASB10Q8WXI3 467 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC5A5Q92911 643 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 NKD1Q969G9 470 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TMEM106AQ96A25 262 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 MOAP1Q96BY2 351 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 GALMQ96C23 342 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SUSD3Q96L08 255 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 PNMA5Q96PV4 448 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SYT11Q9BT88 431 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CDCA4Q9BXL8 241 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 FGFBP2Q9BYJ0 223 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TPSD1Q9BZJ3 242 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ULBP2Q9BZM5 246 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CRISPLD1Q9H336 500 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 TXNIPQ9H3M7 391 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 PLK3Q9H4B4 646 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SYNPO2LQ9H987 977 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 RAB9BQ9NP90 201 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SIX2Q9NPC8 291 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ACSS2Q9NR19 701 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SLC7A10Q9NS82 523 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 NECAP2Q9NVZ3 263 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 FRRS1LQ9P0K9 344 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CLEC1BQ9P126 229 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 LRIT1Q9P2V4 623 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 SS18L2Q9UHA2 77 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 CD207Q9UJ71 328 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 B3GALT5Q9Y2C3 310 aa5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ZFC3H1O60293 1989 aaKnown RBP5.82□□□□□ -1.48
CLCN3-203ENST00000502998 ANKRD11Q6UB99 2663 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-203ENST00000502998 EVPLQ92817 2033 aa5.81□□□□□ -1.48
CLCN3-203ENST00000502998 TCRBV9S1A1TA0A576 114 aa5.81□□□□□ -1.48
CLCN3-203ENST00000502998 TMEM150BA6NC51 233 aa5.81□□□□□ -1.48
CLCN3-203ENST00000502998 RNF222A6NCQ9 220 aa5.81□□□□□ -1.48
CLCN3-203ENST00000502998 OR2W5A6NFC9 320 aa5.81□□□□□ -1.48
CLCN3-203ENST00000502998 NPIPB15A6NHN6 443 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-203ENST00000502998 HIDE1A8MVS5 230 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms