RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 INO80CQ6PI98 192 aaPredicted RBP19.21■□□□□ 0.67
PTPN13-205ENST00000502971 Q6ZS92 163 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 FGD2Q7Z6J4 655 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 TOMM5Q8N4H5 51 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 SGK3Q96BR1 496 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 CNTD2Q9H8S5 307 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 RNF121Q9H920 327 aa19.21■□□□□ 0.67
PTPN13-205ENST00000502971 URB1O60287 2271 aaKnown RBP19.21■□□□□ 0.67
PTPN13-205ENST00000502971 DHRS7CA6NNS2 312 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 LDLRAD4O15165 306 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 GABRA1P14867 456 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 EFNB2P52799 333 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 SNAI3Q3KNW1 292 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 PABPC1L2AQ5JQF8 200 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 OR4D6Q8NGJ1 314 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 PHF21AQ96BD5 680 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 ZNF224Q9NZL3 707 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 ZNF391Q9UJN7 358 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 CACNG2Q9Y698 323 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 FAM240BA0A1B0GVZ2 78 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 ALX3O95076 343 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 FAM157BP0CG42 384 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 TMIGD3P0DMS9 266 aaPredicted RBP19.2■□□□□ 0.66
PTPN13-205ENST00000502971 OR3A2P47893 321 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 TMPRSS3P57727 454 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 GPR176Q14439 515 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 C9orf135Q5VTT2 229 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 FBXW9Q5XUX1 488 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 OR5AS1Q8N127 324 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 FCAMRQ8WWV6 532 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 PP6455Q8WZ26 134 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 ITPKCQ96DU7 683 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 NKX3-1Q99801 234 aaPredicted RBP19.2■□□□□ 0.66
PTPN13-205ENST00000502971 NEURL2Q9BR09 285 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 C7orf50Q9BRJ6 194 aaKnown RBP19.2■□□□□ 0.66
PTPN13-205ENST00000502971 PRSS50Q9UI38 385 aa19.2■□□□□ 0.66
PTPN13-205ENST00000502971 GGT3PA6NGU5 568 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 CENPXA8MT69 81 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 LCATP04180 440 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 COX5BP10606 129 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 RAB6AP20340 208 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 MPGP29372 298 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 ZNF93P35789 620 aaPredicted RBP19.19■□□□□ 0.66
PTPN13-205ENST00000502971 HGFACQ04756 655 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 RNASE12Q5GAN4 147 aaKnown RBP19.19■□□□□ 0.66
PTPN13-205ENST00000502971 UTS2BQ765I0 119 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 KRT74Q7RTS7 529 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 DPPA2Q7Z7J5 298 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 TAAR6Q96RI8 345 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 TRIB1Q96RU8 372 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 MMP28Q9H239 520 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 RGCCQ9H4X1 137 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 C12orf49Q9H741 205 aa19.19■□□□□ 0.66
PTPN13-205ENST00000502971 A0A096LPE4 126 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 A0A0A6YYH2 397 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 A0A1W2PPZ6 126 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 CIB4A0PJX0 185 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 A6NJ64 397 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 BPNT1O95861 308 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 ARR3P36575 388 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 FOXG1P55316 489 aaPredicted RBP19.18■□□□□ 0.66
PTPN13-205ENST00000502971 PLET1Q6UQ28 207 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 UNQ6494/PRO21346Q6UXR6 183 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 ATG5Q9H1Y0 275 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 KCNK15Q9H427 330 aa19.18■□□□□ 0.66
PTPN13-205ENST00000502971 RBMX2Q9Y388 322 aaKnown RBP19.18■□□□□ 0.66
PTPN13-205ENST00000502971 ORC5O43913 435 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 ECDO95905 644 aaPredicted RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 GDNFP39905 211 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 SRP9P49458 86 aaKnown RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 DYRK1AQ13627 763 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 RPUSD3Q6P087 351 aaKnown RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 DNM1P46Q6ZS02 220 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 OR52I2Q8NH67 350 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 CHAC2Q8WUX2 184 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 REEP6Q96HR9 211 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 AUNIPQ9H7T9 357 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 FBLN5Q9UBX5 448 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 RAB22AQ9UL26 194 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 RAXQ9Y2V3 346 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 FRYQ5TBA9 3013 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 TNRC6AQ8NDV7 1962 aaKnown RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 CFAP47Q6ZTR5 3102 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 OR14I1A6ND48 311 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 HNRNPCP07910 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 PRF1P14222 555 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 SLC6A1P30531 599 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 KLF9Q13886 244 aaPredicted RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 TMEM53Q6P2H8 277 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 CPEB3Q8NE35 698 aaKnown RBP19.17■□□□□ 0.66
PTPN13-205ENST00000502971 SEMA6DQ8NFY4 1073 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 CHST5Q9GZS9 411 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 PIGLQ9Y2B2 252 aa19.17■□□□□ 0.66
PTPN13-205ENST00000502971 TMEM8BA6NDV4 472 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 AHRRA9YTQ3 701 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 WISP2O76076 250 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 HCKP08631 526 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 GSTT2BP0CG30 244 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 AP3S2P59780 193 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 BIVMQ86UB2 503 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms