RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ACOT11Q8WXI4 607 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-236ENST00000498808 ZNF702PQ9H963 129 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 NMNAT1Q9HAN9 279 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-236ENST00000498808 ADA2Q9NZK5 511 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 AURKCQ9UQB9 309 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 NDUFAF1Q9Y375 327 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 RYR2Q92736 4967 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 DYNC2H1Q8NCM8 4307 aaKnown RBP12.69□□□□□ -0.38
HDAC6-236ENST00000498808 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-236ENST00000498808 DCTN6O00399 190 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 CD33P20138 364 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 GPR4P46093 362 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 NFYCQ13952 458 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 LRRC75BQ2VPJ9 315 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 HCP5Q6MZN7 132 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 PGBD2Q6P3X8 592 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 OR51G2Q8NGK0 314 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 SEH1LQ96EE3 360 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 TSSK2Q96PF2 358 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 NPFFR1Q9GZQ6 430 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 RHCGQ9UBD6 479 aa12.69□□□□□ -0.38
HDAC6-236ENST00000498808 ACOT8O14734 319 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 ANGPT2O15123 496 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 SELLP14151 372 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 SDHAP31040 664 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 MSX2P35548 267 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-236ENST00000498808 YAP1P46937 504 aaKnown RBP12.68□□□□□ -0.38
HDAC6-236ENST00000498808 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 ZNF92Q03936 586 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 CD69Q07108 199 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 TRAP1Q12931 704 aaKnown RBP12.68□□□□□ -0.38
HDAC6-236ENST00000498808 IKZF1Q13422 519 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 MICBQ29980 383 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 ZBED5Q49AG3 693 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 SLC18B1Q6NT16 456 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 WDR93Q6P2C0 686 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 C11orf53Q8IXP5 236 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 OFCC1Q8IZS5 231 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 PAPD5Q8NDF8 572 aaKnown RBP12.68□□□□□ -0.38
HDAC6-236ENST00000498808 OR2AE1Q8NHA4 323 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 C7orf26Q96N11 449 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 ATF6BQ99941 703 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 FAM234AQ9H0X4 552 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
HDAC6-236ENST00000498808 PNRC2Q9NPJ4 139 aaKnown RBP12.68□□□□□ -0.38
HDAC6-236ENST00000498808 A0A087WUU8 490 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 J3KTA2 159 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 SOCS2O14508 198 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 NDUFB3O43676 98 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 MUC1P15941 1255 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 CDKN2AP42771 156 aaKnown RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 TGM4P49221 684 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 CENPAP49450 140 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 COL10A1Q03692 680 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 RABL3Q5HYI8 236 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 PGM2L1Q6PCE3 622 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 TBPL2Q6SJ96 375 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 TMPRSS11FQ6ZWK6 438 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 WDR86Q86TI4 376 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 PIFOQ8TCI5 191 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 LRRC29Q8WV35 223 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 PITX2Q99697 317 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 NKX3-1Q99801 234 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 B9D2Q9BPU9 175 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 OCSTAMPQ9BR26 566 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 METTL8Q9H825 291 aaKnown RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 NRIP3Q9NQ35 241 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 MRPL15Q9P015 296 aaKnown RBP12.67□□□□□ -0.38
HDAC6-236ENST00000498808 SNX13Q9Y5W8 968 aa12.67□□□□□ -0.38
HDAC6-236ENST00000498808 IGLV1-36A0A0B4J1U3 117 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 GGT3PA6NGU5 568 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 M0R1W7 72 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 FFAR1O14842 300 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 GGT2P36268 569 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 BMXP51813 675 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 ECH1Q13011 328 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 TRAM2Q15035 370 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 AANATQ16613 207 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 GPR139Q6DWJ6 353 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 NANOGP8Q6NSW7 305 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 TSEN54Q7Z6J9 526 aaKnown RBP12.66□□□□□ -0.38
HDAC6-236ENST00000498808 ADCK1Q86TW2 530 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 RNF113BQ8IZP6 322 aaKnown RBP12.66□□□□□ -0.38
HDAC6-236ENST00000498808 Q8N2B8 174 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 SLC26A10Q8NG04 563 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
HDAC6-236ENST00000498808 RNPEPL1Q9HAU8 725 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
HDAC6-236ENST00000498808 M0R135 149 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 BHLHE40O14503 412 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 PTP4A3O75365 173 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 IFNA8P32881 189 aa12.65□□□□□ -0.38
HDAC6-236ENST00000498808 TPTEP56180 551 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms