RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 LINC00597Q9H2U6 94 aa4.29□□□□□ -1.72
PMPCB-208ENST00000498530 RMND1Q9NWS8 449 aa4.29□□□□□ -1.72
PMPCB-208ENST00000498530 POFUT2Q9Y2G5 429 aa4.29□□□□□ -1.72
PMPCB-208ENST00000498530 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
PMPCB-208ENST00000498530 MRPS18BQ9Y676 258 aaKnown RBP4.29□□□□□ -1.72
PMPCB-208ENST00000498530 XRN1Q8IZH2 1706 aaKnown RBP4.29□□□□□ -1.72
PMPCB-208ENST00000498530 FMN2Q9NZ56 1722 aa4.29□□□□□ -1.72
PMPCB-208ENST00000498530 PTPN23Q9H3S7 1636 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 A0A0B4J2E0 115 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ANKRD63C9JTQ0 380 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ALOX12BO75342 701 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 FADS2O95864 444 aaKnown RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 GCGP01275 180 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 RETP07949 1114 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 RHOCP08134 193 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 NQO2P16083 231 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CCNE1P24864 410 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 PPICP45877 212 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ZNF138P52744 262 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 NUP107P57740 925 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 TCP10Q12799 353 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 TNXAQ16473 311 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CPTPQ5TA50 214 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 C12orf54Q6X4T0 127 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ACP7Q6ZNF0 438 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 ABHD12BQ7Z5M8 362 aaPredicted RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 LRRC8AQ8IWT6 810 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 WDR31Q8NA23 367 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CDKL2Q92772 493 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 MARC2Q969Z3 335 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CREB3L1Q96BA8 519 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 SGTBQ96EQ0 304 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 RNF185Q96GF1 192 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 SLC35E1Q96K37 410 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 CHRNA10Q9GZZ6 450 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 PARP12Q9H0J9 701 aaKnown RBP4.28□□□□□ -1.72
PMPCB-208ENST00000498530 REEP1Q9H902 201 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 BRCA2P51587 3418 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
PMPCB-208ENST00000498530 MAP3K5Q99683 1374 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 TRPM2O94759 1503 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 PXDNQ92626 1479 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 RNASEK-C17orf49H0YIS7 233 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 DFFAO00273 331 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 SLC16A7O60669 478 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 SC5DO75845 299 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 TNFSF13O75888 250 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 GLAP06280 429 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 GNAO1P09471 354 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 ZNF30P17039 623 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 ARR3P36575 388 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 HCCSP53701 268 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 AP1S2P56377 157 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 LYZP61626 148 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 SLC7A9P82251 487 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 STX3Q13277 289 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 ZSCAN26Q16670 478 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 TMEM255AQ5JRV8 349 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 DUPD1Q68J44 220 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 STRADAQ7RTN6 431 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 CDKL3Q8IVW4 592 aaPredicted RBP4.27□□□□□ -1.73
PMPCB-208ENST00000498530 RNF145Q96MT1 663 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 WFIKKN1Q96NZ8 548 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 YTHDF1Q9BYJ9 559 aaKnown RBP4.27□□□□□ -1.73
PMPCB-208ENST00000498530 FRMD8P1Q9BZ68 369 aaPredicted RBP4.27□□□□□ -1.73
PMPCB-208ENST00000498530 CLMPQ9H6B4 373 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 MMP26Q9NRE1 261 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 ZNF226Q9NYT6 803 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 TRAPPC4Q9Y296 219 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 HYOU1Q9Y4L1 999 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 TET2Q6N021 2002 aaPredicted RBP4.27□□□□□ -1.73
PMPCB-208ENST00000498530 NRXN3Q9Y4C0 1643 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 CASP8AP2Q9UKL3 1982 aa4.27□□□□□ -1.73
PMPCB-208ENST00000498530 QRICH2Q9H0J4 1663 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 ANKRD20A5PA0PJZ0 165 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 GJE1A6NN92 205 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 KMOO15229 486 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 GIPP09681 153 aaPredicted RBP4.26□□□□□ -1.73
PMPCB-208ENST00000498530 ERGP11308 486 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 PRPS2P11908 318 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 CD1EP15812 388 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 ANP32AP39687 249 aaKnown RBP4.26□□□□□ -1.73
PMPCB-208ENST00000498530 CEACAM3P40198 252 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 DNASE1L1P49184 302 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 TAL2Q16559 108 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 NDUFAF6Q330K2 333 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 FAHD1Q6P587 224 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 LYPD2Q6UXB3 125 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 CD302Q8IX05 232 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 DAW1Q8N136 415 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
PMPCB-208ENST00000498530 C11orf72Q8NBR9 251 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 2372.2 ms