RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 A0A1W2PRX2 142 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 NKX6-3A6NJ46 265 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 PF4V1P10720 104 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 SDHAP31040 664 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 UBE2E1P51965 193 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 TPTEP56180 551 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 ELF3P78545 371 aaPredicted RBP9.52□□□□□ -0.89
CDK9-205ENST00000498339 PRKCDQ05655 676 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 ACSM1Q08AH1 577 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 BLMHQ13867 455 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 PCK2Q16822 640 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 CYBRD1Q53TN4 286 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 LRRC10Q5BKY1 277 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 TEX36Q5VZQ5 186 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 CFAP77Q6ZQR2 320 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 COLCA1Q6ZS62 124 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 RRM2BQ7LG56 351 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 FAM122BQ7Z309 247 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 DPP10Q8N608 796 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 DTX3Q8N9I9 347 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 OR2AJ1Q8NGZ0 328 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 OR8S1Q8NH09 359 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 OR2AE1Q8NHA4 323 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 LRRC29Q8WV35 223 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 C14orf119Q9NWQ9 140 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDK9-205ENST00000498339 A4GNTQ9UNA3 340 aa9.52□□□□□ -0.89
CDK9-205ENST00000498339 V9GYY5 206 aaPredicted RBP9.52□□□□□ -0.89
CDK9-205ENST00000498339 J3KTA2 159 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 BHLHE40O14503 412 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 CDC42EP2O14613 210 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 ANGPTL7O43827 346 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 MUC1P15941 1255 aaPredicted RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 POU1F1P28069 291 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 CRABP1P29762 137 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 GRK5P34947 590 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 BMXP51813 675 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 GMFBP60983 142 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 MAGOHP61326 146 aaKnown RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 FHL1Q13642 323 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 HABP2Q14520 560 aaPredicted RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 GPR139Q6DWJ6 353 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 WDR93Q6P2C0 686 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 ADCK1Q86TW2 530 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 NAA40Q86UY6 237 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 OFCC1Q8IZS5 231 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 Q8N7P7 452 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 C17orf50Q8WW18 174 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 C7orf26Q96N11 449 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 TSSK2Q96PF2 358 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 DCTN5Q9BTE1 182 aa9.51□□□□□ -0.89
CDK9-205ENST00000498339 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 VSX1Q9NZR4 365 aaPredicted RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 MRPL15Q9P015 296 aaKnown RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 PRPF19Q9UMS4 504 aaKnown RBP9.51□□□□□ -0.89
CDK9-205ENST00000498339 M0R135 149 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 ACOT8O14734 319 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 NDUFB2O95178 105 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 PTBP3O95758 552 aaKnown RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 HLA-DQA2P01906 255 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 PF4P02776 101 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 SELLP14151 372 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 ZNF26P17031 533 aaPredicted RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 PAX6P26367 422 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 MDH1P40925 334 aaKnown RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 GZMMP51124 257 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 HIST1H3AP68431 136 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 ZNF92Q03936 586 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 KCNMB1Q16558 191 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 SNAI3Q3KNW1 292 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 RABL3Q5HYI8 236 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 HIST2H3PS2Q5TEC6 136 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 SLC18B1Q6NT16 456 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 ERICH5Q6P6B1 374 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 PTCHD4Q6ZW05 846 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 HIST2H3AQ71DI3 136 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 SPTSSAQ969W0 71 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 ZNF799Q96GE5 643 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 FAM46AQ96IP4 442 aaKnown RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 OR5M11Q96RB7 305 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 SH3GL1Q99961 368 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 SF3B6Q9Y3B4 125 aaKnown RBP9.5□□□□□ -0.89
CDK9-205ENST00000498339 N6AMT1Q9Y5N5 214 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 IER3IP1Q9Y5U9 82 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 CAPN7Q9Y6W3 813 aa9.5□□□□□ -0.89
CDK9-205ENST00000498339 RYR2Q92736 4967 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 A0A087WUU8 490 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 WI2-2373I1.2A0A1W2PRP0 233 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 ANKRD30BLA7E2S9 258 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 E9PQ18 207 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 H0YAE9 185 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 CHST1O43916 411 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 IFNW1P05000 195 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TROVE2P10155 538 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDK9-205ENST00000498339 NDUFB7P17568 137 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms