RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TRIM63Q969Q1 353 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 FAM3DQ96BQ1 224 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 LYZL4Q96KX0 146 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 SORCS2Q96PQ0 1159 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 SOX7Q9BT81 388 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 SLC22A4Q9H015 551 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 PPP1R3EQ9H7J1 279 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 AUNIPQ9H7T9 357 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 TMEM138Q9NPI0 162 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF224Q9NZL3 707 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF319Q9P2F9 582 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 DKK4Q9UBT3 224 aa7.05□□□□□ -1.28
PDZRN3-212ENST00000498048 SHANK1Q9Y566 2161 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 TMEM272A0A1B0GTI8 110 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 C5orf63A6NC05 138 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 E9PLN8 166 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 K7EM74 188 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 K7ENP7 123 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 XRCC2O43543 280 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 HLA-HP01893 362 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 LCATP04180 440 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 TPOP07202 933 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 SPNP16150 400 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ABOP16442 354 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 FAHP16930 419 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 CDK2P24941 298 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 HOXC12P31275 282 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ARR3P36575 388 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 UCNP55089 124 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 TAS2R20P59543 309 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 DGCR2P98153 550 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 KRTAP27-1Q3LI81 207 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 GLYATL3Q5SZD4 288 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 AWAT2Q6E213 333 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 OR2A2Q6IF42 318 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 FAM166AQ6J272 317 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 RPUSD3Q6P087 351 aaKnown RBP7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF585AQ6P3V2 769 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 INO80CQ6PI98 192 aaPredicted RBP7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 DPPA2Q7Z7J5 298 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 NAA40Q86UY6 237 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 CD163Q86VB7 1156 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 OR5D14Q8NGL3 314 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 OR6K3Q8NGY3 331 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 OR14K1Q8NGZ2 314 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 SMIM4Q8WVI0 70 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 PHF21AQ96BD5 680 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 FOXRED1Q96CU9 486 aaPredicted RBP7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 HAVCR1Q96D42 359 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 REEP6Q96HR9 211 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 GPR137Q96N19 417 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 UQCC2Q9BRT2 126 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 CHST5Q9GZS9 411 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 C11orf54Q9H0W9 315 aaPredicted RBP7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ABCG5Q9H222 651 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 NOX3Q9HBY0 568 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF391Q9UJN7 358 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 PIGLQ9Y2B2 252 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 V9GYS6 101 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 ZFHX4Q86UP3 3567 aa7.04□□□□□ -1.28
PDZRN3-212ENST00000498048 FRYQ5TBA9 3013 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 SPTBN4Q9H254 2564 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 hCG_38984A0A1B0GV85 526 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF503-AS2A6NEH8 195 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 FIGNL2A6NMB9 653 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 DHRS7CA6NNS2 312 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 CTDSPLO15194 276 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 LYRM1O43325 122 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 PFDN1O60925 122 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 WDR1O75083 606 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 CTAG2O75638 210 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 RAD51DO75771 328 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 BPNT1O95861 308 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 IL18BPO95998 194 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 TMIGD3P0DMS9 266 aaPredicted RBP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 COX5BP10606 129 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 EDN3P14138 238 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 ARSBP15848 533 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 ZNF93P35789 620 aaPredicted RBP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 MNDAP41218 407 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 RANBP1P43487 201 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 BCAP31P51572 246 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 PER3P56645 1201 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 MRPS10P82664 201 aaKnown RBP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 PLP2Q04941 152 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 PLA2G7Q13093 441 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 CNN3Q15417 329 aaKnown RBP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 SF3B4Q15427 424 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 TBR1Q16650 682 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 GSG1Q2KHT4 349 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 EIF2S3LQ2VIR3 472 aaKnown RBP7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 TBRG1Q3YBR2 411 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 HIKESHIQ53FT3 197 aa7.03□□□□□ -1.28
PDZRN3-212ENST00000498048 C1orf100Q5SVJ3 147 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms