RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 C19orf53Q9UNZ5 99 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 GPR34Q9UPC5 381 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 C17orf51A8MQB3 221 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF705FA8MVS1 300 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TGM5O43548 720 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 HCRTR2O43614 444 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SOD2P04179 222 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 FCGR3AP08637 254 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF705DP0CH99 300 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF705BP0CI00 300 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 HIST1H1BP16401 226 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF20P17024 532 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 IDH3GP51553 393 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLC17A1Q14916 467 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLC35D3Q5M8T2 416 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 MRPL41Q8IXM3 137 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 OR52N4Q8NGI2 321 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 HAS2Q92819 552 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TCTN2Q96GX1 697 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CHST5Q9GZS9 411 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CNTD2Q9H8S5 307 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 RNF122Q9H9V4 155 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 VWA8A3KMH1 1905 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CHD3Q12873 2000 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF724A8MTY0 619 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PGA4P0DJD7 388 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PGA5P0DJD9 388 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CYBAP13498 195 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 FOLR2P14207 255 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 MMP9P14780 707 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF10P21506 573 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CRABP1P29762 137 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 APLNRP35414 380 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 MLF1P58340 268 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TAS2R31P59538 309 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 KREMEN2Q8NCW0 462 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ASB13Q8WXK3 278 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 RAB39BQ96DA2 213 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PRDM13Q9H4Q3 707 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 Q9N2J8 555 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SIRT7Q9NRC8 400 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 POLE3Q9NRF9 147 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PHPT1Q9NRX4 125 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CBLN4Q9NTU7 201 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 DNAJB12Q9NXW2 375 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ICAM5Q9UMF0 924 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TIMM10BQ9Y5J6 103 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 LIPGQ9Y5X9 500 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TRBV5-5A0A0J9YX44 114 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 RAB27BO00194 218 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 BRINP1O60477 761 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SCGB1D1O95968 90 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CST4P01036 141 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 OPN1LWP04000 364 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CXCL1P09341 107 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 H2BFMP0C1H6 154 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 C5AR1P21730 350 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 PAX6P26367 422 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SULT1A2P50226 295 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 KNTC1P50748 2209 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SPCS3P61009 180 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 PHLDA2Q53GA4 152 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 TSPO2Q5TGU0 170 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 DENND4CQ5VZ89 1909 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 PTCRAQ6ISU1 281 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CBLN3Q6UW01 205 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ERN2Q76MJ5 926 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CPNE4Q96A23 557 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 KTI12Q96EK9 354 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLCO5A1Q9H2Y9 848 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 BCO1Q9HAY6 547 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 VSX1Q9NZR4 365 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 DAPP1Q9UN19 280 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 H3BQ15 152 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SYT7O43581 403 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 JTBO76095 146 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 VIPR2P41587 438 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ACAA2P42765 397 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 STARD6P59095 220 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 RAB11AP62491 216 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 NAAAQ02083 359 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ABCA11PQ4W5N1 156 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF880Q6PDB4 577 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 VN1R4Q7Z5H5 301 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 EXD3Q8N9H8 876 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 OR10AD1Q8NGE0 317 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CHST11Q9NPF2 352 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM100Q9NV29 134 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 FRMPD3Q5JV73 1810 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ESPL1Q14674 2120 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 F8VVB4 439 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 F8VWA3 439 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 SOCS1O15524 211 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 LYPD3O95274 346 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 CD5P06127 495 aa9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 LSM6P62312 80 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-223ENST00000497597 ALKBH2Q6NS38 261 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms