RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RAB27BO00194 218 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ARPC3O15145 178 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC6A9P48067 706 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 PRPS1P60891 318 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 UBE2V2Q15819 145 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 EXD3Q8N9H8 876 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ASB5Q8WWX0 329 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 BCO1Q9HAY6 547 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 KIF26BQ2KJY2 2108 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ERGP11308 486 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 SFTPCP11686 197 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 RPS4Y1P22090 263 aaKnown RBP11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 APLNRP35414 380 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 PMELP40967 661 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ZP2Q05996 745 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 TERB2Q8NHR7 220 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 NICN1Q9BSH3 213 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 LMAN1LQ9HAT1 526 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC17A5Q9NRA2 495 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 RAB22AQ9UL26 194 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 MEMO1Q9Y316 297 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 NUP210Q8TEM1 1887 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 XKRYO14609 159 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SFT2D2O95562 160 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 MPIG6BO95866 241 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST3H2BBQ8N257 126 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 C12orf76Q8N812 135 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 DOCK9Q9BZ29 2069 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TRIOO75962 3097 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 WIPF3A6NGB9 483 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 HIDE1A8MVS5 230 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 P2RY10O00398 339 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 JTBO76095 146 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 NSA2O95478 260 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 HCKP08631 526 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 FOSL2P15408 326 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 S1PR1P21453 382 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC26A5P58743 744 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 CDK3Q00526 305 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC17A1Q14916 467 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 MESTQ5EB52 335 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TCEAL8Q8IYN2 117 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 RAB39BQ96DA2 213 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 WDR92Q96MX6 357 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 BANF2Q9H503 90 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 CNTD2Q9H8S5 307 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 LRIT1Q9P2V4 623 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM14AQ9Y6G1 99 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SLCO1B1Q9Y6L6 691 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 A0A1B0GWJ7 208 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 DIRAS3O95661 229 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 IL2RGP31785 369 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 ZNF260Q3ZCT1 412 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 VN1R4Q7Z5H5 301 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC26A1Q9H2B4 701 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 SIRT7Q9NRC8 400 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 MRPL22Q9NWU5 206 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
GAPVD1-220ENST00000497580 TICRRQ7Z2Z1 1910 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 ANAPC1Q9H1A4 1944 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 LOC107986453A0A1B0GWG9 222 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC31A1O15431 190 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC16A7O60669 478 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 IGKV1D-16P01601 117 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 AMY2BP19961 511 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 EMP2P54851 167 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 RAB1AP62820 205 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC7A9P82251 487 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 RPL18Q07020 188 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 DMWDQ09019 674 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 ZNHIT3Q15649 155 aaPredicted RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 CDCP2Q5VXM1 449 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 MALSU1Q96EH3 234 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 NEU1Q99519 415 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 C2orf88Q9BSF0 95 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 SRMSQ9H3Y6 488 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 RAB18Q9NP72 206 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 MRPS2Q9Y399 296 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 H3BQ15 152 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 PRNPP04156 253 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 HPGDP15428 266 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms