RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ERMAPQ96PL5 475 aaPredicted RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 NEDD4LQ96PU5 975 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ABHD1Q96SE0 405 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TEAD3Q99594 435 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 PIGQQ9BRB3 760 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF426Q9BUY5 554 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TBL1XR1Q9BZK7 514 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TMPRSS5Q9H3S3 457 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ISG20L2Q9H9L3 353 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 LPAR2Q9HBW0 351 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 MED11Q9P086 117 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 POLR3KQ9Y2Y1 108 aaPredicted RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 IER3IP1Q9Y5U9 82 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CDH10Q9Y6N8 788 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 A0A087WUJ7 227 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1B0GW15 77 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 FRG2CA6NGY1 282 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 C11orf98E9PRG8 122 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 H3BSH0 61 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NTN3O00634 580 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SIGLEC5O15389 551 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 KLF7O75840 302 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 GABARAPO95166 117 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 GPANK1O95872 356 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 UMODP07911 640 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SYPP08247 313 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SRMP19623 302 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CNR1P21554 472 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 RPL4P36578 427 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PRKCDQ05655 676 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ZFP36L1Q07352 338 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 HNF4GQ14541 408 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 TBCEQ15813 527 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 DGUOKQ16854 277 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CDNFQ49AH0 187 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 FNDC7Q5VTL7 733 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM88Q6PEY1 159 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF613Q6PF04 617 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 HAGHLQ6PII5 290 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PLET1Q6UQ28 207 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 DHRS13Q6UX07 377 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NFAM1Q8NET5 270 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SEMA6DQ8NFY4 1073 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 OR10G3Q8NGC4 313 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NPRL2Q8WTW4 380 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 TCTEX1D2Q8WW35 142 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 OSTF1Q92882 214 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ZMYND19Q96E35 227 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 C5orf30Q96GV9 206 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SLC38A2Q96QD8 506 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 LPAR4Q99677 370 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CACNG6Q9BXT2 260 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 OSGIN1Q9UJX0 560 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PTRH2Q9Y3E5 179 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 RPL36Q9Y3U8 105 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PIEZO2Q9H5I5 2752 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 A0A087WV48 116 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 VSTM2BA6NLU5 285 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CDRT15L2A8MXV6 281 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 C1orf196B1AJZ1 125 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 H0Y8G0 127 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 M0R3G1 203 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 DCTN6O00399 190 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PRODHO43272 600 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 LRP3O75074 770 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ANKRD34CP0C6C1 535 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 LIMS3P0CW19 117 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 LIMS4P0CW20 117 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CCL2P13500 99 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PPP3CBP16298 524 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PTGER4P35408 488 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NOVA1P51513 510 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PRKXP51817 358 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CAV3P56539 151 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 RAB5BP61020 215 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PYY3Q5JQD4 70 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NCR3LG1Q68D85 454 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 TMPRSS11FQ6ZWK6 438 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SSX6Q7RTT6 188 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 NRARPQ7Z6K4 114 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 PLPP5Q8NEB5 264 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 OR14A16Q8NHC5 309 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ERGIC1Q969X5 290 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 FER1L6-AS2Q96M78 137 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 Q96M85 177 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CNN2Q99439 309 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 DPCDQ9BVM2 203 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 CDCA4Q9BXL8 241 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 WNT10AQ9GZT5 417 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 HEXA-AS1Q9H8Q6 139 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 METTL1Q9UBP6 276 aaKnown RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 KLHL21Q9UJP4 597 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 ICAM5Q9UMF0 924 aa5.49□□□□□ -1.53
SSBP1-213ENST00000496622 SPIN1Q9Y657 262 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 RP1L1Q8IWN7 2480 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-213ENST00000496622 IGLV3-12A0A075B6K2 115 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 H3BML4 177 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ADAM10O14672 748 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms