RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MUC15Q8N387 334 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 FCGR1BQ92637 280 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 ITFG2Q969R8 447 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 MRPL37Q9BZE1 423 aaKnown RBP18.67■□□□□ 0.58
C9orf3-222ENST00000496567 COMMD4Q9H0A8 199 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 PLEKHF2Q9H8W4 249 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 ISYNA1Q9NPH2 558 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 SCOCQ9UIL1 159 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 ST6GALNAC2Q9UJ37 374 aa18.67■□□□□ 0.58
C9orf3-222ENST00000496567 IGLV3-9A0A075B6K5 115 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 OR4C45A6NMZ5 311 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 IGHV3-13P01766 116 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 PCMT1P22061 227 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 MPV17P39210 176 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 PSG7Q13046 419 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 MSMPQ1L6U9 139 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 ODF4Q2M2E3 257 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 ZNF676Q8N7Q3 588 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 SMIM19Q96E16 107 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 GPR84Q9NQS5 396 aa18.66■□□□□ 0.58
C9orf3-222ENST00000496567 ROS1P08922 2347 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 B9A039 149 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 MTRF1O75570 445 aaKnown RBP18.65■□□□□ 0.58
C9orf3-222ENST00000496567 CLPTM1O96005 669 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 IGLV3-1P01715 115 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 ISG15P05161 165 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 HSMCR30P0CW71 290 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 ATP6V1B1P15313 513 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 KITLGP21583 273 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 FAM3AP98173 230 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 EFNB3Q15768 340 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 AGAP6Q5VW22 663 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 DMKNQ6E0U4 476 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-222ENST00000496567 C20orf204Q6ZNR8 217 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 OR5AK2Q8NH90 309 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 RPS4Y2Q8TD47 263 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 LYZL4Q96KX0 146 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 SYT3Q9BQG1 590 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 VCX3AQ9NNX9 186 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 GPR160Q9UJ42 338 aa18.65■□□□□ 0.58
C9orf3-222ENST00000496567 hCG_38984A0A1B0GV85 526 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 A0A1B0GVI7 797 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 GGT3PA6NGU5 568 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 P2RY10O00398 339 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 ZFPL1O95159 310 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 DDOSTP39656 456 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 MLLT11Q13015 90 aaPredicted RBP18.64■□□□□ 0.58
C9orf3-222ENST00000496567 UBE2UQ5VVX9 321 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 DOK3Q7L591 496 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 LRP11Q86VZ4 500 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 CCDC54Q8NEL0 328 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 MGLLQ99685 303 aa18.64■□□□□ 0.58
C9orf3-222ENST00000496567 PURGQ9UJV8 347 aaKnown RBP18.64■□□□□ 0.58
C9orf3-222ENST00000496567 FBXO9Q9UK97 447 aaPredicted RBP18.64■□□□□ 0.58
C9orf3-222ENST00000496567 SIRT4Q9Y6E7 314 aaPredicted RBP18.64■□□□□ 0.58
C9orf3-222ENST00000496567 DCHS2Q6V1P9 2916 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 HRNRQ86YZ3 2850 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-222ENST00000496567 A0A1W2PPW3 197 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 LOC390937A0A1W2PQ73 354 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 PLPP2O43688 288 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 TIMM8AO60220 97 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-222ENST00000496567 DANCRP0C864 163 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 ZNF12P17014 697 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 CELP19835 753 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 CCL1P22362 96 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 GSK3AP49840 483 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 OR2T2Q6IF00 324 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 ZFP41Q8N8Y5 198 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 FAM71F1Q96KD3 344 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-222ENST00000496567 PDCD1LG2Q9BQ51 273 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 CBLN4Q9NTU7 201 aa18.64■□□□□ 0.57
C9orf3-222ENST00000496567 CRYBG3Q68DQ2 2970 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 A0A1B0GTI1 187 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 LOC107986453A0A1B0GWG9 222 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 IQCF6A8MYZ5 107 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 SYT7O43581 403 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 DHRS3O75911 302 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 CD1AP06126 327 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 ACHEP22303 614 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 MAP2K3P46734 347 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 SLC3A1Q07837 685 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 GPR50Q13585 617 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 BLMHQ13867 455 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 DOC2BQ14184 412 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 OR8B8Q15620 311 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 KCTD8Q6ZWB6 473 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 DTX2Q86UW9 622 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 RDH10Q8IZV5 341 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 PLPP7Q8NBV4 271 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 UFD1Q92890 307 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 MRPS26Q9BYN8 205 aaKnown RBP18.63■□□□□ 0.57
C9orf3-222ENST00000496567 TAAR3PQ9P1P4 343 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 CGGBP1Q9UFW8 167 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-222ENST00000496567 HHLA2Q9UM44 414 aa18.63■□□□□ 0.57
C9orf3-222ENST00000496567 PNMA8CA0A1B0GUJ8 204 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 CD300LBA8K4G0 201 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 BMP4P12644 408 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 LIPAP38571 399 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 SNRPD2P62316 118 aaKnown RBP18.62■□□□□ 0.57
C9orf3-222ENST00000496567 NKPD1Q17RQ9 610 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms