RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ZNF836Q6ZNA1 936 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 LRRC74BQ6ZQY2 392 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 RRM2BQ7LG56 351 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 CMTM4Q8IZR5 234 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 KRTCAP2Q8N6L1 136 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 NPEPL1Q8NDH3 523 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 BEND2Q8NDZ0 799 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR10AD1Q8NGE0 317 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 AKR7LQ8NHP1 331 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 TFAP2CQ92754 450 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR5M11Q96RB7 305 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 TMEM109Q9BVC6 243 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 VCX3BQ9H321 246 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 ZNF702PQ9H963 129 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 CACYBPQ9HB71 228 aaKnown RBP7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 VCX3AQ9NNX9 186 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 TNFRSF12AQ9NP84 129 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 SIRT7Q9NRC8 400 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 KLHL14Q9P2G3 628 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 RPS6KB2Q9UBS0 482 aa7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 MARCOQ9UEW3 520 aaPredicted RBP7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 NDRG4Q9ULP0 352 aaKnown RBP7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 LSM4Q9Y4Z0 139 aaKnown RBP7.8□□□□□ -1.16
SMARCAL1-213ENST00000496037 IGHV3-64DA0A0J9YX35 117 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 TCRBV5S2A0A599 114 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 DPPA5A6NC42 116 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 RAMP3O60896 148 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR2C1O95371 312 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 ECDO95905 644 aaPredicted RBP7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 PRG2P13727 222 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 SELLP14151 372 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 PRPS1L1P21108 318 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 KITLGP21583 273 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 RANBP1P43487 201 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 CAPZA1P52907 286 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 MRPS25P82663 173 aaKnown RBP7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 CAV1Q03135 178 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 LRRC75BQ2VPJ9 315 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 SERPINA11Q86U17 422 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 C19orf18Q8NEA5 215 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR11L1Q8NGX0 322 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR52P1PQ8NH57 321 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR6X1Q8NH79 312 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 ABHD5Q8WTS1 349 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 UBLCP1Q8WVY7 318 aaPredicted RBP7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 ISOC1Q96CN7 298 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 SLC41A3Q96GZ6 507 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 SLC25A44Q96H78 314 aaPredicted RBP7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 C4orf45Q96LM5 186 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 PAFAH2Q99487 392 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 EPYCQ99645 322 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 ERP44Q9BS26 406 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 ARMC7Q9H6L4 198 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 RNPEPL1Q9HAU8 725 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 INTS9Q9NV88 658 aaKnown RBP7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 GMEB1Q9Y692 573 aa7.79□□□□□ -1.16
SMARCAL1-213ENST00000496037 C11orf98E9PRG8 122 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 HMGN4O00479 90 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 RNASET2O00584 256 aaKnown RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 AZIN1O14977 448 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 CHST1O43916 411 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 SNX3O60493 162 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 OR6A2O95222 327 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 GASTP01350 101 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ALDOBP05062 364 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ZNF32P17041 273 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 PAICSP22234 425 aaKnown RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 CALB2P22676 271 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 TUBG1P23258 451 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 RGS6P49758 472 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 CD83Q01151 205 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ACSM1Q08AH1 577 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 PDCD4Q53EL6 469 aaKnown RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 KCTD18Q6PI47 426 aaPredicted RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 RNF165Q6ZSG1 346 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ASRGL1Q7L266 308 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 NUDCD3Q8IVD9 361 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 LRRC34Q8IZ02 419 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 Q8N2B8 174 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 TMEM116Q8NCL8 245 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 FBXO25Q8TCJ0 367 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 PPP1R14BQ96C90 147 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 CMBLQ96DG6 245 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 PPP3R2Q96LZ3 170 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ZNF607Q96SK3 696 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 C1orf50Q9BV19 199 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 C12orf10Q9HB07 376 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 TUBG2Q9NRH3 451 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 MRPL39Q9NYK5 338 aaKnown RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 DNAJB11Q9UBS4 358 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ZNF443Q9Y2A4 671 aaPredicted RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 ARL2BPQ9Y2Y0 163 aa7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
SMARCAL1-213ENST00000496037 A0A0G2JPF8 293 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 TCRBV4S1A1TA0A5B7 111 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 HNRNPCL3B7ZW38 293 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SLC25A17O43808 307 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms