RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 POLR1DQ9Y2S0 133 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 CSAG2Q9Y5P2 127 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 SDK2Q58EX2 2172 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 C5orf63A6NC05 138 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM14DPA8MWL7 114 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 RER1O15258 196 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 DUX1O43812 170 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 ADAP1O75689 374 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 TIAF1O95411 115 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
PTPN7-217ENST00000495688 CRHP06850 196 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 ZNF17P17021 662 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 OR5AS1Q8N127 324 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 ARMC10Q8N2F6 343 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 DDIT4LQ96D03 193 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 C1orf147Q96MC9 270 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-217ENST00000495688 AIFM2Q9BRQ8 373 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 MRPL13Q9BYD1 178 aaKnown RBP11.53□□□□□ -0.56
PTPN7-217ENST00000495688 SLC7A5P2Q9GIP4 190 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 KLRF1Q9NZS2 232 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 GPR31O00270 319 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 LAP3P28838 519 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM50BP56557 158 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 NXPH1P58417 271 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 FAM69BQ5VUD6 431 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 ZNF529Q6P280 563 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 OR5AP2Q8NGF4 316 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 DCUN1D4Q92564 292 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 CA14Q9ULX7 337 aa11.53□□□□□ -0.56
PTPN7-217ENST00000495688 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 A0A0B4J2A0 478 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 E9PLN8 166 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 H0YIZ8 118 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF20P17024 532 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 MPZP25189 248 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 PSMB6P28072 239 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 SLC9A3R2Q15599 337 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 SLC25A45Q8N413 288 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 NFAM1Q8NET5 270 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 OR4K17Q8NGC6 315 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 OR8B12Q8NGG6 310 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 ELP5Q8TE02 316 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 RNF126Q9BV68 326 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 C5orf66Q9H5L9 145 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 SHPKQ9UHJ6 478 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 RPH3AQ9Y2J0 694 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 MRPS28Q9Y2Q9 187 aaKnown RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 EML6Q6ZMW3 1958 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 MSGN1A6NI15 193 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF121P58317 390 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 CLRN1P58418 232 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 RSPO4Q2I0M5 234 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM88Q6PEY1 159 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 ANKRD37Q7Z713 158 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM17Q86X19 198 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 MISPQ8IVT2 679 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 POC1BQ8TC44 478 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 PAQR8Q8TEZ7 354 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 MAFIPQ8WZ33 124 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM230Q96A57 120 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 RAB3CQ96E17 227 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-217ENST00000495688 B3GALT5Q9Y2C3 310 aa11.52□□□□□ -0.57
PTPN7-217ENST00000495688 FRYQ5TBA9 3013 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 A0A1B0GW55 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ACTL6AO96019 429 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 GIMD1P0DJR0 217 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ADCYAP1P18509 176 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF169Q14929 603 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-217ENST00000495688 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ZSCAN4Q8NAM6 433 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 OR10G3Q8NGC4 313 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ARHGAP5-AS1Q96IT6 56 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 ALKBH4Q9NXW9 302 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 KLHL13Q9P2N7 655 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 DUX4Q9UBX2 424 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 SDCBPO00560 298 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-217ENST00000495688 CDC14BO60729 498 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 HTR3BO95264 441 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 PGA4P0DJD7 388 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms