RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 ACTR6Q9GZN1 396 aa13.7□□□□□ -0.22
SHISA5-216ENST00000494854 GHITMQ9H3K2 345 aa13.7□□□□□ -0.22
SHISA5-216ENST00000494854 RHBDD3Q9Y3P4 386 aa13.7□□□□□ -0.22
SHISA5-216ENST00000494854 CLEC18AA5D8T8 446 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF716A6NP11 495 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 H7C417 338 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 LDLRAD4O15165 306 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 RBBP9O75884 186 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 GABRA1P14867 456 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 CTSSP25774 331 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 CLDN15P56746 228 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 GALK2Q01415 458 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ELFN2Q5R3F8 820 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ABLIM2Q6H8Q1 611 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 CLEC18BQ6UXF7 455 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 LRRC18Q8N456 261 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 CLEC18CQ8NCF0 446 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 OR4D6Q8NGJ1 314 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 OR5D14Q8NGL3 314 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 OR56B4Q8NH76 319 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ROBO4Q8WZ75 1007 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 C20orf85Q9H1P6 137 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 TMEM138Q9NPI0 162 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ING3Q9NXR8 418 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF319Q9P2F9 582 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 MTFP1Q9UDX5 166 aa13.69□□□□□ -0.22
SHISA5-216ENST00000494854 SETXQ7Z333 2677 aaKnown RBP13.69□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF20P17024 532 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 RAB3AP20336 220 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 CAPZA1P52907 286 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 HIST1H3AP68431 136 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 HIST2H3PS2Q5TEC6 136 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF529Q6P280 563 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 HIST2H3AQ71DI3 136 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 FAM57BQ71RH2 274 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 NOXA1Q86UR1 476 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 OR52N4Q8NGI2 321 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 HAS2Q92819 552 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 CNTD2Q9H8S5 307 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 GPR84Q9NQS5 396 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 LUZP4Q9P127 313 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 SLC5A6Q9Y289 635 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 PTPN13Q12923 2485 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 ALDOBP05062 364 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 PSMB1P20618 241 aaKnown RBP13.68□□□□□ -0.22
SHISA5-216ENST00000494854 CCL1P22362 96 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 ANOS1P23352 680 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 NTF4P34130 210 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 OR1C1Q15619 314 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 GSG1Q2KHT4 349 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 LINC00696Q6ZRV3 163 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 OR13C9Q8NGT0 318 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 CAPSLQ8WWF8 208 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 PTX4Q96A99 478 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 SNRNP40Q96DI7 357 aaKnown RBP13.68□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF837Q96EG3 531 aaPredicted RBP13.68□□□□□ -0.22
SHISA5-216ENST00000494854 RNF170Q96K19 258 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 SOX7Q9BT81 388 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 HES7Q9BYE0 225 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 MED28Q9H204 178 aa13.68□□□□□ -0.22
SHISA5-216ENST00000494854 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
SHISA5-216ENST00000494854 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 OR5H15A6NDH6 313 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 LINC01387J3KSC0 135 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 YES1P07947 543 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 ABOP16442 354 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 PRSS3P35030 304 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 MRPS15P82914 257 aaKnown RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 MRPS34P82930 218 aaKnown RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 GUCA2AQ02747 115 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 PCGF3Q3KNV8 242 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 CCDC92Q53HC0 331 aaPredicted RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 FAAP20Q6NZ36 180 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 DOK3Q7L591 496 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 SULF2Q8IWU5 870 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 GIMAP1Q8WWP7 306 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 DEDD2Q8WXF8 326 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 CPNE4Q96A23 557 aaPredicted RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 FAM71F1Q96KD3 344 aaPredicted RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 UQCC2Q9BRT2 126 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 OR51J1Q9H342 316 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 TP63Q9H3D4 680 aaPredicted RBP13.67□□□□□ -0.22
SHISA5-216ENST00000494854 TAS2R8Q9NYW2 309 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 PLA2G3Q9NZ20 509 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 B4GALT7Q9UBV7 327 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 CSAG2Q9Y5P2 127 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 RELNP78509 3460 aa13.67□□□□□ -0.22
SHISA5-216ENST00000494854 HPNP05981 417 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 ERCC1P07992 297 aaPredicted RBP13.66□□□□□ -0.22
SHISA5-216ENST00000494854 CSF1P09603 554 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 STOMP27105 288 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 RFC3P40938 356 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 MAB21L1Q13394 359 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 ZNF169Q14929 603 aaPredicted RBP13.66□□□□□ -0.22
SHISA5-216ENST00000494854 PRR30Q53SZ7 412 aaPredicted RBP13.66□□□□□ -0.22
SHISA5-216ENST00000494854 PDSS1Q5T2R2 415 aa13.66□□□□□ -0.22
SHISA5-216ENST00000494854 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms