RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMEM14AQ9Y6G1 99 aa14.88□□□□□ -0.03
HDAC4-211ENST00000494800 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
HDAC4-211ENST00000494800 ANKRD30BLA7E2S9 258 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 PLPP2O43688 288 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 PNPP00491 289 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 SLC2A5P22732 501 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 GATA3P23771 443 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 CD200P41217 278 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 GATA4P43694 442 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 ZNF121P58317 390 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-211ENST00000494800 ACTR3P61158 418 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 SLX4IPQ5VYV7 408 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 ZFP1Q6P2D0 407 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 FAHD2BQ6P2I3 314 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-211ENST00000494800 FAM57BQ71RH2 274 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 KRT77Q7Z794 578 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 LRRC28Q86X40 367 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-211ENST00000494800 SPSB4Q96A44 273 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 FAHD2AQ96GK7 314 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 REEP6Q96HR9 211 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 PGAM5Q96HS1 289 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 TEAD3Q99594 435 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 OAZ3Q9UMX2 235 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 ABCA2Q9BZC7 2435 aa14.87□□□□□ -0.03
HDAC4-211ENST00000494800 JMJD1CQ15652 2540 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 SLC22A31A6NKX4 558 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 ZAR1LA6NP61 321 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 PRKYO43930 277 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 MITFO75030 526 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-211ENST00000494800 FOXH1O75593 365 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 CPT2P23786 658 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 ZMYND11Q15326 602 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 GFOD2Q3B7J2 385 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 GID4Q8IVV7 300 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 PLPP7Q8NBV4 271 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 OR56B2PQ8NGI1 322 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 ZNF420Q8TAQ5 688 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-211ENST00000494800 PYDC1Q8WXC3 89 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 ASB17Q8WXJ9 295 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 SIGLEC11Q96RL6 698 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 AMELYQ99218 206 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 CNN2Q99439 309 aaKnown RBP14.86□□□□□ -0.03
HDAC4-211ENST00000494800 CIB1Q99828 191 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 RBM4BQ9BQ04 359 aaKnown RBP14.86□□□□□ -0.03
HDAC4-211ENST00000494800 MROQ9BYG7 248 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 FN3KRPQ9HA64 309 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 BRD7Q9NPI1 651 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 C14orf119Q9NWQ9 140 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 DCAF16Q9NXF7 216 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 ORC6Q9Y5N6 252 aa14.86□□□□□ -0.03
HDAC4-211ENST00000494800 IGHV3-64DA0A0J9YX35 117 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 J3QLI3 93 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 CYB5R3P00387 301 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-211ENST00000494800 GNALP38405 381 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 MAB21L1Q13394 359 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 DCAF12L2Q5VW00 463 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 NXNL2Q5VZ03 156 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 DEGS2Q6QHC5 323 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 MEPCEQ7L2J0 689 aaKnown RBP14.85□□□□□ -0.03
HDAC4-211ENST00000494800 TCEANCQ8N8B7 351 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 CSNK2A3Q8NEV1 391 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 OR8S1Q8NH09 359 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 TMEM163Q8TC26 289 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 SGK3Q96BR1 496 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 PATZ1Q9HBE1 687 aaKnown RBP14.85□□□□□ -0.03
HDAC4-211ENST00000494800 ZNF391Q9UJN7 358 aa14.85□□□□□ -0.03
HDAC4-211ENST00000494800 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.84□□□□□ -0.038e-12■■■□□ 18.8
HDAC4-211ENST00000494800 TANC2Q9HCD6 1990 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PPIAL4EA0A075B759 164 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 SAC3D1A6NKF1 404 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PPIAL4DF5H284 164 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PHYHO14832 338 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 FSTL3O95633 263 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 MRPL3P09001 348 aaKnown RBP14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PPIAL4FP0DN26 164 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 ALOX5APP20292 161 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PSMA6P60900 246 aaKnown RBP14.84□□□□□ -0.03
HDAC4-211ENST00000494800 FAM3AP98173 230 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 KPNB1Q14974 876 aaKnown RBP14.84□□□□□ -0.03
HDAC4-211ENST00000494800 ESCO2Q56NI9 601 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 C12orf73Q69YU5 71 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 LRRN1Q6UXK5 716 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 Q8TCH9 128 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 RAB3IPQ96QF0 476 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-211ENST00000494800 MNTQ99583 582 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 RIBC2Q9H4K1 309 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 PPIAL4AQ9Y536 164 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 LRP12Q9Y561 859 aa14.84□□□□□ -0.03
HDAC4-211ENST00000494800 MALRD1Q5VYJ5 2156 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 C5orf63A6NC05 138 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 ACOD1A6NK06 481 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 ZNF254O75437 659 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 LCN2P80188 198 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 KCNJ8Q15842 424 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 PRAMEF6Q5VXH4 476 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 NLRC3Q7RTR2 1065 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 PRSS45Q7RTY3 260 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 TMEM158Q8WZ71 300 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 IL4I1Q96RQ9 567 aa14.83□□□□□ -0.04
HDAC4-211ENST00000494800 GABARAPL3Q9BY60 117 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms