RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IFNA6P05013 189 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 CXCR1P25024 350 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 THBS4P35443 961 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
SDF4-207ENST00000494748 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
SDF4-207ENST00000494748 TMEM104Q8NE00 496 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 BCL2L14Q9BZR8 327 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 GHRLQ9UBU3 117 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 C1orf196B1AJZ1 125 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 ANOS1P23352 680 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 ACKR3P25106 362 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 GALNSP34059 522 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 GLO1Q04760 184 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 OR2A2Q6IF42 318 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 SLC22A24Q8N4F4 322 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 METTL27Q8N6F8 245 aaPredicted RBP13.63□□□□□ -0.23
SDF4-207ENST00000494748 OR13G1Q8NGZ3 307 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 GABRG3Q99928 467 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 SULT4A1Q9BR01 284 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 SPEGQ15772 3267 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 BLACEA4D250 179 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 TO15178 435 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 PPIHO43447 177 aaKnown RBP13.63□□□□□ -0.23
SDF4-207ENST00000494748 SLC6A8P48029 635 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 TMEM50BP56557 158 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 GPBAR1Q8TDU6 330 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 C2orf50Q96LR7 162 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 NOSIPQ9Y314 301 aaKnown RBP13.63□□□□□ -0.23
SDF4-207ENST00000494748 STARD10Q9Y365 291 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 EXPH5Q8NEV8 1989 aa13.63□□□□□ -0.23
SDF4-207ENST00000494748 ADAMTS9Q9P2N4 1935 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 SOCS1O15524 211 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 HCRTR2O43614 444 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 MMP16P51512 607 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 P2RY4P51582 365 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 FABP9Q0Z7S8 132 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 EBPQ15125 230 aaKnown RBP13.62□□□□□ -0.23
SDF4-207ENST00000494748 TCEAL3Q969E4 200 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 MRPL38Q96DV4 380 aaKnown RBP13.62□□□□□ -0.23
SDF4-207ENST00000494748 IL23AQ9NPF7 189 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 MIOXQ9UGB7 285 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 OSGIN2Q9Y236 505 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 A6NLC8 198 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 ADAM10O14672 748 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 CLN5O75503 358 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 NSA2O95478 260 aaKnown RBP13.62□□□□□ -0.23
SDF4-207ENST00000494748 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 ZNF708P17019 499 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 UCP2P55851 309 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 CLDN6P56747 220 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 HSD17B7P56937 341 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 FOXK1P85037 733 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 BIKQ13323 160 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 SLC22A18ASQ8N1D0 253 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 ARRDC1Q8N5I2 433 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 OR10S1Q8NGN2 331 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 RELTQ969Z4 430 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 IP6K3Q96PC2 410 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 RPH3AQ9Y2J0 694 aaPredicted RBP13.62□□□□□ -0.23
SDF4-207ENST00000494748 MYO15AQ9UKN7 3530 aa13.62□□□□□ -0.23
SDF4-207ENST00000494748 CLDN4O14493 209 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 MT-ND4LP03901 98 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 BCKDHBP21953 392 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 FPR2P25090 351 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 SMCO1Q147U7 214 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 TSC22D1Q15714 1073 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.61□□□□□ -0.23
SDF4-207ENST00000494748 RNF133Q8WVZ7 376 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 TUBA4BQ9H853 241 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 LINC01553A4QN01 128 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 FRG2CA6NGY1 282 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 FTCDNL1E5RQL4 147 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 EFNA3P52797 238 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 COX15Q7KZN9 410 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 KDM8Q8N371 416 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 ZNF561Q8N587 486 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 PNLDC1Q8NA58 520 aaKnown RBP13.61□□□□□ -0.23
SDF4-207ENST00000494748 RHBDD1Q8TEB9 315 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 FKTNO75072 461 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 IGKV3-11P04433 115 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 GABRA4P48169 554 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 SLC26A5P58743 744 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 STARD6P59095 220 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 AWAT1Q58HT5 328 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 TMEM31Q5JXX7 168 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 ACER2Q5QJU3 275 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 LANCL2Q9NS86 450 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 SRPK3Q9UPE1 567 aa13.61□□□□□ -0.23
SDF4-207ENST00000494748 MAP1BP46821 2468 aaKnown RBP13.6□□□□□ -0.23
SDF4-207ENST00000494748 TRBV23-1A0A0A0MS06 115 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 HIST1H1DP16402 221 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms