RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 GCH1P30793 250 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
ERCC3-209ENST00000494464 MAGEB1P43366 347 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 HTR5AP47898 357 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 SERPINB10P48595 397 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 VBP1P61758 197 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 PPP1CBP62140 327 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ACTC1P68032 377 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ACTA1P68133 377 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 BDH1Q02338 343 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 DGUOKQ16854 277 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 FAM209AQ5JX71 171 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 SLC35D3Q5M8T2 416 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 LCN1P1Q5VSP4 162 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ARL9Q6T311 187 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
ERCC3-209ENST00000494464 KLHL36Q8N4N3 616 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 NPEPL1Q8NDH3 523 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 KLF14Q8TD94 323 aaPredicted RBP11.25□□□□□ -0.61
ERCC3-209ENST00000494464 RPL3LQ92901 407 aaKnown RBP11.25□□□□□ -0.61
ERCC3-209ENST00000494464 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 C4orf45Q96LM5 186 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF649Q9BS31 505 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 OR2J1Q9GZK6 312 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 NUAK2Q9H093 628 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 ERVK13-1Q9NX77 482 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
ERCC3-209ENST00000494464 JMJD1CQ15652 2540 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 LRP5LA4QPB2 252 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 OR6C6A6NF89 314 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 J3QW42 95 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 APOL3O95236 402 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 ABHD16AO95870 558 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 ADH4P08319 380 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 FAM157CP0CG43 387 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TUBG1P23258 451 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 MPV17P39210 176 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-209ENST00000494464 MMP15P51511 669 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 SLC25A1P53007 311 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TPBGQ13641 420 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TMEM255AQ5JRV8 349 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 SPATA46Q5T0L3 261 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 LEG1Q6P5S2 330 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 SHFQ7M4L6 423 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 JAZF1Q86VZ6 243 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 ACBD7Q8N6N7 88 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 SDR9C7Q8NEX9 313 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 OR52E2Q8NGJ4 325 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 YIPF5Q969M3 257 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 DDOQ99489 341 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TEAD3Q99594 435 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 NMNAT2Q9BZQ4 307 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 OR51E2Q9H255 320 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 DCSTAMPQ9H295 470 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 RERGLQ9H628 205 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 MED20Q9H944 212 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-209ENST00000494464 PLEK2Q9NYT0 353 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
ERCC3-209ENST00000494464 ASH2LQ9UBL3 628 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 STUB1Q9UNE7 303 aa11.24□□□□□ -0.61
ERCC3-209ENST00000494464 CAB39Q9Y376 341 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-209ENST00000494464 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
ERCC3-209ENST00000494464 DCTN6O00399 190 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 MPZL1O95297 269 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 RENP00797 406 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 NGFP01138 241 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 SBK2P0C263 348 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 COL8A2P25067 703 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
ERCC3-209ENST00000494464 ATP6V1E1P36543 226 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF81P51508 661 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 TMEM33P57088 247 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
ERCC3-209ENST00000494464 HIST1H3AP68431 136 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 GLO1Q04760 184 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 KLHL12Q53G59 568 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 ZMAT1Q5H9K5 638 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 HIST2H3PS2Q5TEC6 136 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 HIST2H3AQ71DI3 136 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 ZBTB46Q86UZ6 589 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 PHC2Q8IXK0 858 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 OR4K13Q8NH42 304 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 UFD1Q92890 307 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 OTULINQ96BN8 352 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 TSSK2Q96PF2 358 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 NMNAT3Q96T66 252 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 SOX7Q9BT81 388 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms