RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ARPC3O15145 178 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TIMM8AO60220 97 aaPredicted RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 KRT36O76013 467 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 RENP00797 406 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TFP02787 698 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 MSMBP08118 114 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 ANPEPP15144 967 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 HIST1H1CP16403 213 aaKnown RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 GSTM3P21266 225 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TUBG1P23258 451 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 FPR3P25089 353 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 SRP14P37108 136 aaKnown RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 ZNF134P52741 427 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 HMGA2P52926 109 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TSPAN31Q12999 210 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 MTX3Q5HYI7 312 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 FAHD2BQ6P2I3 314 aaPredicted RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 DNM1P34Q6PK57 102 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 CORO6Q6QEF8 472 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 RINLQ6ZS11 566 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 GLCCI1Q86VQ1 547 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 PHC2Q8IXK0 858 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 OR6V1Q8N148 313 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 GJC3Q8NFK1 279 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 FANK1Q8TC84 345 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 GNPDA2Q8TDQ7 276 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 RAB1CQ92928 201 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 PTP4A1Q93096 173 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TMEM186Q96B77 213 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 CMBLQ96DG6 245 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 ELMOD3Q96FG2 381 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 FAHD2AQ96GK7 314 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 TIMD4Q96H15 378 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 AIFM2Q9BRQ8 373 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 ZNF665Q9H7R5 613 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 RPRD1BQ9NQG5 326 aaKnown RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 TUBG2Q9NRH3 451 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 ACTR3BQ9P1U1 418 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 PURGQ9UJV8 347 aaKnown RBP6.83□□□□□ -1.32
RIF1-211ENST00000494333 POLR1DQ9Y2S0 133 aa6.83□□□□□ -1.32
RIF1-211ENST00000494333 A0A087WWL8 130 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 IGLV1-36A0A0B4J1U3 117 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 OR6C68A6NDL8 312 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 OR6C6A6NF89 314 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 TNFRSF11BO00300 401 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 TRIAP1O43715 76 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 IDH3BO43837 385 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 HLA-DQA2P01906 255 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 PCMT1P22061 227 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 RBMXP38159 391 aaKnown RBP6.82□□□□□ -1.32
RIF1-211ENST00000494333 GNALP38405 381 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 GSSP48637 474 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 TNFAIP6P98066 277 aaPredicted RBP6.82□□□□□ -1.32
RIF1-211ENST00000494333 MS4A2Q01362 244 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 SLC3A1Q07837 685 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 FOXI1Q12951 378 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 PPP1R8Q12972 351 aaKnown RBP6.82□□□□□ -1.32
RIF1-211ENST00000494333 SPRNQ5BIV9 151 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 CLEC12AQ5QGZ9 265 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 ACSM5Q6NUN0 579 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 PGBD2Q6P3X8 592 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 PEG10Q86TG7 708 aaKnown RBP6.82□□□□□ -1.32
RIF1-211ENST00000494333 DHFR2Q86XF0 187 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 NPEPL1Q8NDH3 523 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 SDR9C7Q8NEX9 313 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 OR2Z1Q8NG97 314 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 OR52E2Q8NGJ4 325 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 OR5L1Q8NGL2 311 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 HAVCR1Q96D42 359 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 COG8Q96MW5 612 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 EGLN3Q9H6Z9 239 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 LHFPL6Q9Y693 200 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
RIF1-211ENST00000494333 ISPDA4D126 451 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 F5H5K5 113 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 PLPP2O43688 288 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 FAM107AO95990 144 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 CD55P08174 381 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 SBK2P0C263 348 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 T-ENOLP0DO92 83 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 ATP6V1B2P21281 511 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 KITLGP21583 273 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 CALB2P22676 271 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 TNFSF4P23510 183 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 RGS6P49758 472 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 ERFP50548 548 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 HIST1H3AP68431 136 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.81□□□□□ -1.32
RIF1-211ENST00000494333 COX10Q12887 443 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 HNRNPA0Q13151 305 aaKnown RBP6.81□□□□□ -1.32
RIF1-211ENST00000494333 RSPO1Q2MKA7 263 aaPredicted RBP6.81□□□□□ -1.32
RIF1-211ENST00000494333 KRTAP24-1Q3LI83 254 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 SLC36A3Q495N2 470 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 HIST2H3PS2Q5TEC6 136 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 LIPNQ5VXI9 398 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 OR2T2Q6IF00 324 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 ZNF620Q6ZNG0 422 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 Q6ZNX1 250 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 Q6ZR03 302 aa6.81□□□□□ -1.32
RIF1-211ENST00000494333 HIST2H3AQ71DI3 136 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms