RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CDX2Q99626 313 aaPredicted RBP2.44□□□□□ -2.02
SSB-212ENST00000494051 BPIFA3Q9BQP9 254 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 PLA2G12AQ9BZM1 189 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 SPACA1Q9HBV2 294 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 NEK6Q9HC98 313 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 TREM1Q9NP99 234 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 MRPL22Q9NWU5 206 aaKnown RBP2.44□□□□□ -2.02
SSB-212ENST00000494051 EMC3Q9P0I2 261 aa2.44□□□□□ -2.02
SSB-212ENST00000494051 ANKRD12Q6UB98 2062 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 OR5H1A6NKK0 313 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 KRBOX1C9JBD0 128 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 F8VZ95 297 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 AKR7A2O43488 359 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 RNF13O43567 381 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 EIF4E2O60573 245 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 CDH16O75309 829 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 NIPSNAP2O75323 286 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 CRTAPO75718 401 aaPredicted RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 MBP02144 154 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 APOA1P02647 267 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 STAG3L2P0CL84 134 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 RBM34P42696 430 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 PRLHRP49683 370 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 PLTPP55058 493 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 GFERP55789 205 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 RPS23P62266 143 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 RPS11P62280 158 aaKnown RBP eCLIP2.43□□□□□ -2.02
SSB-212ENST00000494051 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 SARNPP82979 210 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 YIF1BQ5BJH7 314 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 SOHLH1Q5JUK2 328 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 LIN9Q5TKA1 542 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 FAM222AQ5U5X8 452 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 CERS6Q6ZMG9 384 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 TRMT10CQ7L0Y3 403 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 BZW1Q7L1Q6 419 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 LUZP2Q86TE4 346 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 KATNAL2Q8IYT4 538 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 CSGALNACT2Q8N6G5 542 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 MCUR1Q96AQ8 359 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 LRRC45Q96CN5 670 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 TVP23CQ96ET8 276 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 CHP1Q99653 195 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 KCNS3Q9BQ31 491 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 LLPHQ9BRT6 129 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 BLZF1Q9H2G9 400 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 CYP3A43Q9HB55 503 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 IL20Q9NYY1 176 aa2.43□□□□□ -2.02
SSB-212ENST00000494051 STX18Q9P2W9 335 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 ZNF230Q9UIE0 474 aaPredicted RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 BZW2Q9Y6E2 419 aaKnown RBP2.43□□□□□ -2.02
SSB-212ENST00000494051 MYO3BQ8WXR4 1341 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 IGKV1-8A0A0C4DH67 115 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 SMKR1H3BMG3 65 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 GOLGA8TH3BQL2 631 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 PSMD11O00231 422 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 CTAG2O75638 210 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 TGM6O95932 706 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 IGHV3-11P01762 117 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ARG1P05089 322 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 PRKACAP17612 351 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ATF6P18850 670 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 CTAG1AP78358 180 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 XRCC4Q13426 336 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 RBMY1FQ15415 496 aaKnown RBP2.42□□□□□ -2.02
SSB-212ENST00000494051 CHRNA6Q15825 494 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 KLHL40Q2TBA0 621 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 TEX30Q5JUR7 227 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 DEGS2Q6QHC5 323 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 VTCN1Q7Z7D3 282 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 SLC7A5P1Q8MH63 180 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ASCC1Q8N9N2 400 aaKnown RBP2.42□□□□□ -2.02
SSB-212ENST00000494051 C11orf72Q8NBR9 251 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 OR52E2Q8NGJ4 325 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 RAB3IL1Q8TBN0 382 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 LRRC20Q8TCA0 184 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 TSEN15Q8WW01 171 aaKnown RBP2.42□□□□□ -2.02
SSB-212ENST00000494051 APH1BQ8WW43 257 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 IP6K3Q96PC2 410 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 PANX1Q96RD7 426 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 SHANK2-AS3Q9BTD1 123 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 BBS2Q9BXC9 721 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ANGPTL4Q9BY76 406 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 NDEL1Q9GZM8 345 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 RACGAP1Q9H0H5 632 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 VCX3BQ9H321 246 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 RGCCQ9H4X1 137 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 PSTPIP2Q9H939 334 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 TMEM27Q9HBJ8 222 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 GCNT4Q9P109 453 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 CD300AQ9UGN4 299 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ATP6V1DQ9Y5K8 247 aa2.42□□□□□ -2.02
SSB-212ENST00000494051 ZCCHC6Q5VYS8 1495 aaKnown RBP2.41□□□□□ -2.02
SSB-212ENST00000494051 SBNO1A3KN83 1393 aa2.41□□□□□ -2.02
SSB-212ENST00000494051 IGHV3-49A0A0A0MS15 119 aa2.41□□□□□ -2.02
SSB-212ENST00000494051 GLSO94925 669 aaPredicted RBP2.41□□□□□ -2.02
SSB-212ENST00000494051 KLHL2O95198 593 aa2.41□□□□□ -2.02
SSB-212ENST00000494051 CPN2P22792 545 aa2.41□□□□□ -2.02
SSB-212ENST00000494051 PSMB5P28074 263 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms