RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CRIP3Q6Q6R5 217 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 DRAM2Q6UX65 266 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PGAP1Q75T13 922 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 NAA40Q86UY6 237 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 ZBTB8BQ8NAP8 495 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 CCDC54Q8NEL0 328 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 OR5D14Q8NGL3 314 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 OR1F12Q8NHA8 337 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 FGFBP3Q8TAT2 258 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 FNDC9Q8TBE3 224 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 GIMAP1Q8WWP7 306 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 AKAP1Q92667 903 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 HAS2Q92819 552 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 RNF170Q96K19 258 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 CACNG6Q9BXT2 260 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 OR2H1Q9GZK4 316 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 GHITMQ9H3K2 345 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 ZDHHC11Q9H8X9 412 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 BCO1Q9HAY6 547 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 RANGRFQ9HD47 186 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 DIABLOQ9NR28 239 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 SLC7A10Q9NS82 523 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 MCUBQ9NWR8 336 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PAQR5Q9NXK6 330 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PTPRZ1P23471 2315 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 WIPF3A6NGB9 483 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF724A8MTY0 619 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 SULT1C2O00338 296 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 IGHV3-9P01782 118 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 CSF1P09603 554 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 H2AFB2P0C5Z0 115 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 GSTT2BP0CG30 244 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 FAHP16930 419 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 TNFSF10P50591 281 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 NOVA1P51513 510 aaKnown RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 RAG2P55895 527 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 SSBP1Q04837 148 aaKnown RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 ECH1Q13011 328 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 CBX3Q13185 183 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 CLN3Q13286 438 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 SNTB2Q13425 540 aaKnown RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 AWAT2Q6E213 333 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 IGFL2Q6UWQ7 119 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 OR2W3Q7Z3T1 314 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 TCTE3Q8IZS6 198 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 PAQR4Q8N4S7 273 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 ACBD4Q8NC06 268 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 FDCSPQ8NFU4 85 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 OR4C16Q8NGL9 310 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 AKR7LQ8NHP1 331 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 DEDD2Q8WXF8 326 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 DMRTB1Q96MA1 342 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 SPACA5Q96QH8 159 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 GAL3ST1Q99999 423 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 BEX2Q9BXY8 128 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 CHST5Q9GZS9 411 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 OR10A2Q9H208 303 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF224Q9NZL3 707 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 ATPIF1Q9UII2 106 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 POU2F3Q9UKI9 436 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 MRPS28Q9Y2Q9 187 aaKnown RBP9.31□□□□□ -0.92
CLCN6-208ENST00000494028 DNAJC13O75165 2243 aa9.31□□□□□ -0.92
CLCN6-208ENST00000494028 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 A0A0A6YYJ9 748 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 TRGV5A0A0B4J1U4 118 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 MEIS3P1A6NDR6 274 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 RPL36A-HNRNPH2H7BZ11 118 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 MRPL33O75394 65 aaKnown RBP9.3□□□□□ -0.92
CLCN6-208ENST00000494028 DHFRP00374 187 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 LPLP06858 475 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 HCKP08631 526 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 PATE4P0C8F1 98 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 PRSS3P35030 304 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF93P35789 620 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-208ENST00000494028 PSG4Q00888 419 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 CD83Q01151 205 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 KCNJ8Q15842 424 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 RSPO4Q2I0M5 234 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-208ENST00000494028 PCGF3Q3KNV8 242 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 LINC00303Q3SY05 128 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 UTS2BQ765I0 119 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 SLC16A14Q7RTX9 510 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 RTN4RL2Q86UN3 420 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 SKA3Q8IX90 412 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 TUSC5Q8IXB3 177 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 OR52H1Q8NGJ2 320 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 OR56B4Q8NH76 319 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 AQP3Q92482 292 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 PHF21AQ96BD5 680 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 C10orf35Q96D05 121 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms