RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 RICTORQ6R327 1708 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 NEO1Q92859 1461 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ARHGAP35Q9NRY4 1499 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 C1orf232A0A0U1RR37 186 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 GJE1A6NN92 205 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 RCBTB2O95199 551 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 GLAP06280 429 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 CD1EP15812 388 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 GGT2P36268 569 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF138P52744 262 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 STX17P56962 302 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 OR2B8PP59922 312 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 UBE2G2P60604 165 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 FCN2Q15485 313 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 TTLL9Q3SXZ7 439 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 C9orf129Q5T035 196 aaKnown RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 THOC7Q6I9Y2 204 aaKnown RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 EPGNQ6UW88 154 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ACP7Q6ZNF0 438 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 Q6ZVH6 145 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 SLC30A8Q8IWU4 369 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 STPG2Q8N412 459 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 OR10W1Q8NGF6 305 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 OR2L8Q8NGY9 312 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ACTRT1Q8TDG2 376 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 IFT81Q8WYA0 676 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ING5Q8WYH8 240 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 LRRC45Q96CN5 670 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF514Q96K75 400 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 MYOZ1Q9NP98 299 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 FRMPD1Q5SYB0 1578 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 LRPPRCP42704 1394 aaKnown RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 SULT1C2O00338 296 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 NIPSNAP2O75323 286 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 BGLAPP02818 100 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 PNMA6AP0CW24 399 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 GIMD1P0DJR0 217 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 P2RX1P51575 399 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 RIPPLY3P57055 190 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 STX4Q12846 297 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 RGNQ15493 299 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MAPRE2Q15555 327 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 POU2AF1Q16633 256 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 METTL21CQ5VZV1 264 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 Q6ZTC4 211 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MAPK1IP1LQ8NDC0 245 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MAGEB18Q96M61 343 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 C7orf50Q9BRJ6 194 aaKnown RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 YTHDF1Q9BYJ9 559 aaKnown RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 C6orf50Q9HD87 102 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 RGS18Q9NS28 235 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 UVRAGQ9P2Y5 699 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CYB5R1Q9UHQ9 305 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CFL2Q9Y281 166 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CACNA1FO60840 1977 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MYO5CQ9NQX4 1742 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 ZMYM4Q5VZL5 1548 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 FHOD3Q2V2M9 1422 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 FMN1Q68DA7 1419 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CD109Q6YHK3 1445 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 PCDH11XQ9BZA7 1347 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 M0QXV9 152 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 SLC35E2BP0CK96 405 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 PSMB6P28072 239 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 KDELR2P33947 212 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 PCK1P35558 622 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 GALR1P47211 349 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MLF1P58340 268 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 TPBGQ13641 420 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 TCTEX1D4Q5JR98 221 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 NCCRP1Q6ZVX7 275 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 PLCZ1Q86YW0 608 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 DAW1Q8N136 415 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CA13Q8N1Q1 262 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 ATPAF2Q8N5M1 289 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 METTL13Q8N6R0 699 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 RGP1Q92546 391 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CREB3L1Q96BA8 519 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 BTN2A3PQ96KV6 586 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 SRRQ9GZT4 340 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 ARV1Q9H2C2 271 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 IFT46Q9NQC8 304 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 FAM49BQ9NUQ9 324 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 MAT2BQ9NZL9 334 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 CSAG2Q9Y5P2 127 aa3.36□□□□□ -1.87
VPS13A-212ENST00000493341 TTC37Q6PGP7 1564 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13A-212ENST00000493341 GOLGA8JA6NMD2 632 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 E7ENQ6 273 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 CTNSO60931 367 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 SUPT3HO75486 399 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 GOLGA8HP0CJ92 632 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms