RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OR8B12Q8NGG6 310 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 OR56B2PQ8NGI1 322 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 CNIH3Q8TBE1 160 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 CCL17Q92583 94 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 LGALS12Q96DT0 336 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 PBOV1Q9GZY1 135 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 SLC22A4Q9H015 551 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 CHODLQ9H9P2 273 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 DLL4Q9NR61 685 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 FAM206AQ9NX38 181 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 TREM2Q9NZC2 230 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
CCM2-217ENST00000492883 R4GMQ9 66 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 CSMD1Q96PZ7 3565 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 ANKRD30BLA7E2S9 258 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 H0YL77 283 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 WBP4O75554 376 aaKnown RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 SULT1C4O75897 302 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 HLA-DPB1P04440 258 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 CA6P23280 308 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 GIFP27352 417 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 NR4A2P43354 598 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 GSK3AP49840 483 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 TMEM33P57088 247 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 ISL1P61371 349 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 ZNF85Q03923 595 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 RIPK1Q13546 671 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 SMN1Q16637 294 aaKnown RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 KLHL22Q53GT1 634 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 LIPNQ5VXI9 398 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 FAM220AQ7Z4H9 259 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 COMMD2Q86X83 199 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 SIGLEC11Q96RL6 698 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 ZNF391Q9UJN7 358 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 OR52A1Q9UKL2 312 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 NOP16Q9Y3C1 178 aaKnown RBP11.86□□□□□ -0.51
CCM2-217ENST00000492883 SNX5Q9Y5X3 404 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 HSPE1-MOB4S4R3N1 261 aa11.86□□□□□ -0.51
CCM2-217ENST00000492883 USF3Q68DE3 2245 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 H0YJX3 145 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 J3QRE1 110 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 MLNRO43193 412 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 PNPP00491 289 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 GNAO1P09471 354 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 TACSTD2P09758 323 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 USF1P22415 310 aaPredicted RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 SRP9P49458 86 aaKnown RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 AQP4P55087 323 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 MFGE8Q08431 387 aaPredicted RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 RAB40BQ12829 278 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 RIN1Q13671 783 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 OR8G1Q15617 311 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 TP53I3Q53FA7 332 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 SPRNQ5BIV9 151 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 BCL2L15Q5TBC7 163 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 KCTD20Q7Z5Y7 419 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 LURAP1LQ8IV03 231 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 ITLN1Q8WWA0 313 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 TFAP2CQ92754 450 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 PPP1R14AQ96A00 147 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 COX4I2Q96KJ9 171 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 NUFIP1Q9UHK0 495 aaKnown RBP11.85□□□□□ -0.51
CCM2-217ENST00000492883 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 CACNG2Q9Y698 323 aa11.85□□□□□ -0.51
CCM2-217ENST00000492883 A0A0U1RQV5 110 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 VWC2LB2RUY7 222 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 F5H5P2 479 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 J3QLW9 94 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 GMDSO60547 372 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 SRSF10O75494 262 aaKnown RBP11.84□□□□□ -0.51
CCM2-217ENST00000492883 RP2O75695 350 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 ZNF19P17023 458 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 SLC3A1Q07837 685 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
CCM2-217ENST00000492883 SNCBQ16143 134 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 ZNF684Q5T5D7 378 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 THAP5Q7Z6K1 395 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 LHFPL3Q86UP9 236 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 FTMTQ8N4E7 242 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 CSNK2A3Q8NEV1 391 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 OR52I1Q8NGK6 324 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 OR8S1Q8NH09 359 aa11.84□□□□□ -0.51
CCM2-217ENST00000492883 OR51E1Q8TCB6 317 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms