RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PPIAL4AQ9Y536 164 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 MMP24Q9Y5R2 645 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 FUOMA2VDF0 154 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 IMPA2O14732 288 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 NDUFB2O95178 105 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 CRABP1P29762 137 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 RRM2P31350 389 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 GATA4P43694 442 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 MMP16P51512 607 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 AP2S1P53680 142 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 HIST1H3AP68431 136 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 ECH1Q13011 328 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 DGCR6Q14129 220 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 SPRNQ5BIV9 151 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 MESTQ5EB52 335 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 HIST2H3PS2Q5TEC6 136 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 FDX2Q6P4F2 183 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 DNM1P34Q6PK57 102 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 DPY19L2P2Q6ZN68 376 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 COLCA1Q6ZS62 124 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 HIST2H3AQ71DI3 136 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 IGFN1Q86VF2 1251 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 OR8H3Q8N146 312 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 GJC3Q8NFK1 279 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 OR13C2Q8NGS9 318 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 ITLN1Q8WWA0 313 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 RAB40AQ8WXH6 277 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 DACT3Q96B18 629 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 FAM71F1Q96KD3 344 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 Q96M85 177 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 OR2V2Q96R30 315 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 SSBP3Q9BWW4 388 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 MS4A7Q9GZW8 240 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 HDHD2Q9H0R4 259 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 EMC7Q9NPA0 242 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 KRCC1Q9NPI7 259 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 SPATA2Q9UM82 520 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 NOP16Q9Y3C1 178 aaKnown RBP7.66□□□□□ -1.18
HDAC3-212ENST00000492407 PCDHGB1Q9Y5G3 927 aa7.66□□□□□ -1.18
HDAC3-212ENST00000492407 IGHV2-70DA0A0C4DH43 119 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CEACAM18A8MTB9 384 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 IQCF6A8MYZ5 107 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 H3BUI4 141 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CXCR6O00574 342 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CDC42EP2O14613 210 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SLC16A7O60669 478 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CTLA4P16410 223 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CD80P33681 288 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 NPY4RP50391 375 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 BCAP31P51572 246 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 KRR1Q13601 381 aaKnown RBP7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SLC9A3R2Q15599 337 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF404Q494X3 552 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 FAM98BQ52LJ0 330 aaKnown RBP7.65□□□□□ -1.18
HDAC3-212ENST00000492407 TEX30Q5JUR7 227 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 LEG1Q6P5S2 330 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 HACD2Q6Y1H2 254 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 FKBP9P1Q75LS8 142 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 VTCN1Q7Z7D3 282 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ZBTB46Q86UZ6 589 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 KLBQ86Z14 1044 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 PRR18Q8N4B5 295 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ATG16L2Q8NAA4 619 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 Q8TCH9 128 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SLC7A13Q8TCU3 470 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 C22orf15Q8WYQ4 148 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 NEIL1Q96FI4 390 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-212ENST00000492407 MEGF10Q96KG7 1140 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 C1orf147Q96MC9 270 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SLC30A2Q9BRI3 323 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 HCAR1Q9BXC0 346 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SLC22A4Q9H015 551 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 MYLK2Q9H1R3 596 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 POFUT1Q9H488 388 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 MARCH7Q9H992 704 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 NOX4Q9NPH5 578 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM100Q9NV29 134 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 CMTM6Q9NX76 183 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ACTR3BQ9P1U1 418 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 RHCGQ9UBD6 479 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ASH2LQ9UBL3 628 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SIGLEC7Q9Y286 467 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ADAM18Q9Y3Q7 739 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 SNX13Q9Y5W8 968 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 ENPP4Q9Y6X5 453 aa7.65□□□□□ -1.18
HDAC3-212ENST00000492407 PKD1L1Q8TDX9 2849 aa7.65□□□□□ -1.19
HDAC3-212ENST00000492407 H7C1C5 153 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 J3KTA2 159 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 PHYHO14832 338 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ARPC3O15145 178 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 GSTA4O15217 222 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 NOS1APO75052 506 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF682O95780 498 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 LIPFP07098 398 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF26P17031 533 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 RHCEP18577 417 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SLC15A1P46059 708 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms