RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	GPR157	Q5UAW9	335 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	PRAMEF6	Q5VXH4	476 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	C16orf87	Q6PH81	154 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	LYPD2	Q6UXB3	125 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	SPATC1	Q76KD6	591 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	NAA40	Q86UY6	237 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR52L1	Q8NGH7	329 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR10S1	Q8NGN2	331 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZDHHC16	Q969W1	377 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	DUS3L	Q96G46	650 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	TECTB	Q96PL2	329 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	ADAT1	Q9BUB4	502 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	DGCR6L	Q9BY27	220 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	YY1AP1	Q9H869	796 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	FN3KRP	Q9HA64	309 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	MRPL22	Q9NWU5	206 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	KIF17	Q9P2E2	1029 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	SOX21	Q9Y651	276 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170		U3KQV3	271 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	MDFIC2	A0A1B0GVS7	189 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	CD300LB	A8K4G0	201 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	GAST	P01350	101 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	CA6	P23280	308 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	PSMB10	P40306	273 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	BPIFB3	P59826	476 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	DEFB112	Q30KQ8	113 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	SLC35F1	Q5T1Q4	408 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	RPL13AP3	Q6NVV1	102 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	BRD3OS	Q6XYD6	125 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	ZNF841	Q6ZN19	808 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	C19orf18	Q8NEA5	215 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	PROKR2	Q8NFJ6	384 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	MAP6	Q96JE9	813 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	SLITRK2	Q9H156	845 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	ERVK-18	Q9QC07	812 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	RNF7	Q9UBF6	113 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	CDH10	Q9Y6N8	788 aa		12.77	□□□□□ -0.37
MRPL55-231	ENST00000492170	GGT3P	A6NGU5	568 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	C22orf46	C9J442	243 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	LGALS8	O00214	317 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	HOXA3	O43365	443 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	GMDS	O60547	372 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	MDK	P21741	143 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	PYCR1	P32322	319 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	MPPED2	Q15777	294 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	SNAI3	Q3KNW1	292 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	C1orf146	Q5VVC0	180 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	CD276	Q5ZPR3	534 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	CD300LD	Q6UXZ3	194 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	RASSF6	Q6ZTQ3	369 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	TMEM179B	Q7Z7N9	219 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	AQP11	Q8NBQ7	271 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	PLPP7	Q8NBV4	271 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	OR10G2	Q8NGC3	310 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	OR2T4	Q8NH00	348 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	TMIGD2	Q96BF3	282 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	PCGF1	Q9BSM1	259 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	TRIM36	Q9NQ86	728 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	IL20	Q9NYY1	176 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	DNAJB9	Q9UBS3	223 aa		12.76	□□□□□ -0.37
MRPL55-231	ENST00000492170	SRRM5	B3KS81	715 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	C3orf80	F5H4A9	247 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	KCNAB3	O43448	404 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	LIPF	P07098	398 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	RPS27	P42677	84 aa	Known RBP	12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	ZNF92	Q03936	586 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	MZT1	Q08AG7	82 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	OR8B8	Q15620	311 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	DRAM2	Q6UX65	266 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	TREML4	Q6UXN2	200 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	BOLL	Q8N9W6	283 aa	Known RBP	12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	SPERT	Q8NA61	448 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	CYB561A3	Q8NBI2	242 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	OR2AE1	Q8NHA4	323 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	GIPC3	Q8TF64	312 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	TAF15	Q92804	592 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	COPS4	Q9BT78	406 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	PRDM13	Q9H4Q3	707 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	EGLN3	Q9H6Z9	239 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	NOX4	Q9NPH5	578 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	ARMC1	Q9NVT9	282 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	MRPL15	Q9P015	296 aa	Known RBP	12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	CTSZ	Q9UBR2	303 aa		12.75	□□□□□ -0.37
MRPL55-231	ENST00000492170	TRAV38-1	A0A0B4J264	116 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170		A0A1B0GUS0	222 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	OOEP	A6NGQ2	149 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	TVP23A	A6NH52	213 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170		A6NLC8	198 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	P2RY10	O00398	339 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	ADAM20	O43506	726 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	NDUFA2	O43678	99 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	PTBP3	O95758	552 aa	Known RBP	12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	CRYBA1	P05813	215 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	OMG	P23515	440 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	OTX1	P32242	354 aa	Predicted RBP	12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	CFHR2	P36980	270 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	GLYATL3	Q5SZD4	288 aa		12.74	□□□□□ -0.37
MRPL55-231	ENST00000492170	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms