RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ERFP50548 548 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 PPP1R8Q12972 351 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 RSPO1Q2MKA7 263 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 KRTAP27-1Q3LI81 207 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 C1orf146Q5VVC0 180 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 PARP8Q8N3A8 854 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 ADAT1Q9BUB4 502 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 MS4A7Q9GZW8 240 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 ZMAT3Q9HA38 289 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 TMEM165Q9HC07 324 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 ERVK-18Q9QC07 812 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 A6NLC8 198 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 RGS9O75916 674 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 VENTXO95231 258 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 H2BFMP0C1H6 154 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF12P17014 697 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 FASP25445 335 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 ZFP36P26651 326 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 PITPNBP48739 271 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 SPRNQ5BIV9 151 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 DCDC5Q6ZRR9 648 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 NAA40Q86UY6 237 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 ERI1Q8IV48 349 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 C3orf56Q8N813 242 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF511Q8NB15 262 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 OR6N2Q8NGY6 317 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 OR4Q3Q8NH05 313 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 Q8TCH9 128 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 SIGLEC11Q96RL6 698 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 OR10A2Q9H208 303 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 RGCCQ9H4X1 137 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 PNRC2Q9NPJ4 139 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 DCAF16Q9NXF7 216 aa13.91□□□□□ -0.18
PDLIM2-217ENST00000491330 TRAV38-1A0A0B4J264 116 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 IGHV3-64DA0A0J9YX35 117 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 hCG_1807616A0A1W2PRN6 198 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 F5H0A9 414 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 PHYHO14832 338 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 MLNRO43193 412 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 PRODHO43272 600 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 GYPBP06028 91 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 OTX1P32242 354 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 RPS7P62081 194 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 ESRRGP62508 458 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 CDK5Q00535 292 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 OR8B8Q15620 311 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 ATP6AP1Q15904 470 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF404Q494X3 552 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 SLC35D3Q5M8T2 416 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 CSNK2A3Q8NEV1 391 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 RAB40AQ8WXH6 277 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 UTP4Q969X6 686 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 ZMYND19Q96E35 227 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 SLC6A7Q99884 636 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 TMEM246Q9BRR3 403 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 OR51V1Q9H2C8 321 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 SLC25A19Q9HC21 320 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 UFSP2Q9NUQ7 469 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 MXRA5Q9NR99 2828 aa13.9□□□□□ -0.18
PDLIM2-217ENST00000491330 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 A0A1B0GWJ7 208 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 TIPRLO75663 272 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 GLCEO94923 617 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ZNF205O95201 554 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 AVPP01185 164 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 LIPFP07098 398 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 RPS27P42677 84 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 CX3CR1P49238 355 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ZNF92Q03936 586 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 C1orf229Q6ZS94 237 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 CCDC121Q6ZUS5 278 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 SPATC1Q76KD6 591 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 DPY19L4Q7Z388 723 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ZDHHC13Q8IUH4 622 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 BOLLQ8N9W6 283 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 DEFB108BQ8NET1 73 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ITFG2Q969R8 447 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 TECTBQ96PL2 329 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 HIST1H2AAQ96QV6 131 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 NIPAL2Q9H841 368 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 MARCH7Q9H992 704 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 ABCB9Q9NP78 766 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 MMP26Q9NRE1 261 aa13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-217ENST00000491330 STAB1Q9NY15 2570 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 FBN1P35555 2871 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 LGALS8O00214 317 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 ENSAO43768 121 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 FAM20BO75063 409 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 GRPP07492 148 aa13.88□□□□□ -0.19
PDLIM2-217ENST00000491330 LYNP07948 512 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms