RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TAS2R60P59551 318 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 AP3S2P59780 193 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR2B8PP59922 312 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 HERVK_113P61574 105 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPS14P62263 151 aaKnown RBP3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 GLO1Q04760 184 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 PPIDQ08752 370 aaKnown RBP3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TAL2Q16559 108 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 SMUG1Q53HV7 270 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TFDP3Q5H9I0 405 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L9Q6RFH8 374 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACP7Q6ZNF0 438 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 RALGPS2Q86X27 583 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 VKORC1L1Q8N0U8 176 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 C6orf223Q8N319 242 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 PRELID2Q8N945 189 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 C19orf18Q8NEA5 215 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CCDC54Q8NEL0 328 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR5AK3PQ8NH89 298 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CDS1Q92903 461 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUS3LQ96G46 650 aaKnown RBP3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAM210BQ96KR6 192 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR5B12Q96R08 314 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAIM2Q9BWQ8 316 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTR6Q9GZN1 396 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CWH43Q9H720 699 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 SIAEQ9HAT2 523 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 PLEKHA1Q9HB21 404 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TMBIM4Q9HC24 238 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 C6orf50Q9HD87 102 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLN6Q9NWW5 311 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 SDHAF2Q9NX18 166 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 KCNIP1Q9NZI2 227 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4Q9UBX2 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CDHR2Q9BYE9 1310 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TRAV8-7A0A075B6U6 113 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 HACD1B0YJ81 288 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 TMX2-CTNND1H3BSU7 103 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ENSAO43768 121 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 SEMA3DO95025 777 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 IGHV2-5P01817 119 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PRB2P02812 416 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CATP04040 527 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 IFNA6P05013 189 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PCCAP05165 728 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 GIMD1P0DJR0 217 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CRISP2P16562 243 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF7P17097 686 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CMA1P23946 247 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 MSNP26038 577 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PPOXP50336 477 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPL14P50914 215 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 UGT2B15P54855 530 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTA2P62736 377 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTG2P63267 376 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTC1P68032 377 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTA1P68133 377 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ECH1Q13011 328 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 FLOT2Q14254 428 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 GGTLC2Q14390 218 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNHIT3Q15649 155 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZBTB6Q15916 424 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 COX19Q49B96 90 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RBM48Q5RL73 367 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 SDHAF4Q5VUM1 108 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 TRIM40Q6P9F5 258 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RFLNAQ6ZTI6 216 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 BBS7Q8IWZ6 715 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PGAM4Q8N0Y7 254 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUSP18Q8NEJ0 188 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 VN1R2Q8NFZ6 395 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PHOSPHO2Q8TCD6 241 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RNF133Q8WVZ7 376 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CMTM5Q96DZ9 223 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CMTM7Q96FZ5 175 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 MRPL45Q9BRJ2 306 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 HDHD3Q9BSH5 251 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RSG1Q9BU20 258 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 C20orf85Q9H1P6 137 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 TMEM38AQ9H6F2 299 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 UBE2ZQ9H832 354 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 TRIM45Q9H8W5 580 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 CTPS2Q9NRF8 586 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 PLEKHJ1Q9NW61 149 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 RHBDL2Q9NX52 303 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 IL37Q9NZH6 218 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ING4Q9UNL4 249 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 SAMHD1Q9Y3Z3 626 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 TBL2Q9Y4P3 447 aaKnown RBP3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 ASTN1O14525 1302 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 MROH7Q68CQ1 1323 aa3.1□□□□□ -1.91
HMGB1P38-201ENST00000490557 A0A0A6YYD5 115 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ANKRD20A5PA0PJZ0 165 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 H7C2Y5 167 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 PLPP3O14495 311 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC16A4O15374 487 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ALOX12BO75342 701 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 TRAPPC6AO75865 159 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms