RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 RNF138Q8WVD3 245 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 DNAJA4Q8WW22 397 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ACOT12Q8WYK0 555 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 OSTF1Q92882 214 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 INTS12Q96CB8 462 aaKnown RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ARSGQ96EG1 525 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 RNFT2Q96EX2 444 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 GMPPAQ96IJ6 420 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ZNF845Q96IR2 970 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 PRRC1Q96M27 445 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 SLC38A2Q96QD8 506 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 OR5B2Q96R09 309 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ATF6BQ99941 703 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 MARVELD1Q9BSK0 173 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 TMEM43Q9BTV4 400 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 FNDC11Q9BVV2 318 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 RSPO3Q9BXY4 272 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 TMEM185BQ9H7F4 350 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 TMEM27Q9HBJ8 222 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 BCL2L10Q9HD36 194 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 MAN2C1Q9NTJ4 1040 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 FLRT3Q9NZU0 649 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 KLHL9Q9P2J3 617 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 CHRNA9Q9UGM1 479 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ICAM5Q9UMF0 924 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ZNF443Q9Y2A4 671 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 EXOGQ9Y2C4 368 aaKnown RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 HDGFL3Q9Y3E1 203 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ZNF337Q9Y3M9 751 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ALG5Q9Y673 324 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 KCNE3Q9Y6H6 103 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ZNF469Q96JG9 3925 aaPredicted RBP4.13□□□□□ -1.75
CSTF1-205ENST00000490539 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
CSTF1-205ENST00000490539 ACANP16112 2415 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 FREM3P0C091 2139 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 A0A0G2JMP0 313 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 FAM240BA0A1B0GVZ2 78 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 TUBAL3A6NHL2 446 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 NPIPB9F8W1W9 429 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 GABRPO00591 440 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 GPR171O14626 319 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ADAM10O14672 748 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 TNFSF11O14788 317 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ZNHIT1O43257 154 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 DNPH1O43598 174 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 OR2T1O43869 369 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CXCL13O43927 109 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 HPGDSO60760 199 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CRYZL1O95825 349 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 HLA-DPB1P04440 258 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CHRM4P08173 479 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 LIMS3P0CW19 117 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 LIMS4P0CW20 117 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 PSKH1P11801 424 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ARSBP15848 533 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 M6PRP20645 277 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CEACAM8P31997 349 aaPredicted RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 HTR2BP41595 481 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 MTNR1AP48039 350 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 INPP1P49441 399 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CLDN18P56856 261 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 RGS8P57771 180 aaPredicted RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 SLC35A1P78382 337 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ADORA2A-AS1P86434 159 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 FOXF1Q12946 379 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 TSPAN31Q12999 210 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 MRPL28Q13084 256 aaKnown RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 TRAM2Q15035 370 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CD226Q15762 336 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 AWAT1Q58HT5 328 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 SLC25A53Q5H9E4 307 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 MRPL2Q5T653 305 aaKnown RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 OR2G6Q5TZ20 316 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 SIGIRRQ6IA17 410 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ULK3Q6PHR2 472 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CBLN3Q6UW01 205 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 MEX3BQ6ZN04 569 aaKnown RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 FCRLAQ7L513 359 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 SSX8Q7RTT4 187 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 RBM45Q8IUH3 476 aaKnown RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ZNF100Q8IYN0 542 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 GCNT2Q8N0V5 402 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 IQCF1Q8N6M8 205 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 ARIH2OSQ8N7S6 290 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 RNF152Q8N8N0 203 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 OR5M1Q8NGP8 315 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 OR10D3Q8NH80 312 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 FNDC9Q8TBE3 224 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 PIGXQ8TBF5 258 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 DEDD2Q8WXF8 326 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 AKAP1Q92667 903 aaKnown RBP eCLIP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
CSTF1-205ENST00000490539 TMEM203Q969S6 136 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 CREB3L1Q96BA8 519 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 OTULINQ96BN8 352 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 NTNG2Q96CW9 530 aa4.12□□□□□ -1.75
CSTF1-205ENST00000490539 HYLS1Q96M11 299 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms