RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PRR23D2P0DMB1 279 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 MUC1P15941 1255 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 PTMSP20962 102 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 SERPINB5P36952 375 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 DAP3P51398 398 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 SCRN3Q0VDG4 424 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 GK2Q14410 553 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 PCK2Q16822 640 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 C9orf66Q5T8R8 295 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 DHRS4L2Q6PKH6 230 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 HDDC2Q7Z4H3 204 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 NANOGNBQ7Z5D8 188 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 C11orf42Q8N5U0 333 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 OR5L1Q8NGL2 311 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 OR5D13Q8NGL4 314 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 RPS4Y2Q8TD47 263 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 TCP10LQ8TDR4 215 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 LRRC8CQ8TDW0 803 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 MAL2Q969L2 176 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 APOBEC3DQ96AK3 386 aaPredicted RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 VPS33AQ96AX1 596 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 SEH1LQ96EE3 360 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 DUS3LQ96G46 650 aaKnown RBP5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 ITCHQ96J02 903 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 WACQ9BTA9 647 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF426Q9BUY5 554 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 ALG12Q9BV10 488 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 NUF2Q9BZD4 464 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 TMEM27Q9HBJ8 222 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 C1orf123Q9NWV4 160 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 SELENONQ9NZV5 590 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 PITPNC1Q9UKF7 332 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 NDUFAF1Q9Y375 327 aa5.62□□□□□ -1.51
PDLIM1-203ENST00000490391 A0A087WUV0 522 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 TMEM238LA0A1B0GVL6 79 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 A0A1W2PPM1 405 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 BLOC1S5-TXNDC5H3BN57 136 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 NDUFB3O43676 98 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 CHP2O43745 196 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 SNRNP70P08621 437 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 ALDOCP09972 364 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 ETS2P15036 469 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 CA6P23280 308 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 IL12AP29459 219 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 SLC6A1P30531 599 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 S100A3P33764 101 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 AQP2P41181 271 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 CEBPDP49716 269 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 DYNLT3P51808 116 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 RGS8P57771 180 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 NCALDP61601 193 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 SELPLGQ14242 412 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 MICBQ29980 383 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 GTDC1Q4AE62 458 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 CCDC92Q53HC0 331 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 ATPAF1Q5TC12 328 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 STUMQ69YW2 141 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 SLC36A1Q7Z2H8 476 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 TSPYL5Q86VY4 417 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 C11orf53Q8IXP5 236 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 MKXQ8IYA7 352 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 OR1F12Q8NHA8 337 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 MOSPD2Q8NHP6 518 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 BBS10Q8TAM1 723 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 H1FXQ92522 213 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 RAX2Q96IS3 184 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 CACYBPQ9HB71 228 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 MEPEQ9NQ76 525 aaPredicted RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 STX18Q9P2W9 335 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 ATPIF1Q9UII2 106 aa5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
PDLIM1-203ENST00000490391 IGLV1-36A0A0B4J1U3 117 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 A0A1W2PPL8 197 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 FAM90A22PA8MWA6 464 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 KPNA4O00629 521 aaPredicted RBP5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 UMPSP11172 480 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 NR2C1P13056 603 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 GSK3BP49841 420 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 CLNS1AP54105 237 aaKnown RBP5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 ERVFRD-1P60508 538 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 ECH1Q13011 328 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 OR8G1Q15617 311 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 DGUOKQ16854 277 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 RSPO1Q2MKA7 263 aaPredicted RBP5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 VMACQ2NL98 169 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 OTPQ5XKR4 325 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 ZNF613Q6PF04 617 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 WDR86Q86TI4 376 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 CNPY4Q8N129 248 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 OSR2Q8N2R0 312 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 RPP25LQ8N5L8 163 aaKnown RBP5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 CCDC63Q8NA47 563 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 GAFA1Q96PS6 74 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 ADAT1Q9BUB4 502 aaKnown RBP5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 HCAR1Q9BXC0 346 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 TXNIPQ9H3M7 391 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 TPT1P8Q9HAU6 139 aa5.6□□□□□ -1.51
PDLIM1-203ENST00000490391 ABCB10Q9NRK6 738 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms