RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MED31Q9Y3C7 131 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 KIR2DS1A0A191URI9 304 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 GXYLT2A0PJZ3 443 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 UNC119BA6NIH7 251 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 EFCAB9A8MZ26 197 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 MYL12BO14950 172 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 CHP2O43745 196 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 AIREO43918 545 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 ENTPD6O75354 484 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 BCAS1O75363 584 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 RAB36O95755 333 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 LCKP06239 509 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 GKN3PP0CG01 181 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 HSMCR30P0CW71 290 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 ADORA3P0DMS8 318 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF182P17025 639 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NR4A1P22736 598 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 LCN1P31025 176 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 MAP3K8P41279 467 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 RBM34P42696 430 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 ATP12AP54707 1039 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 RAC3P60763 192 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 TUBA1BP68363 451 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 HOXC5Q00444 222 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 MED22Q15528 200 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 MOGQ16653 247 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 PDZK1Q5T2W1 519 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 AP1ARQ63HQ0 302 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 KCTD18Q6PI47 426 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 LINC00299Q6ZSB3 139 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 TUBA1AQ71U36 451 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NKAIN4Q8IVV8 208 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NRMQ8IXM6 262 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 SPICQ8N5J4 248 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 OR2T33Q8NG76 320 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 TMEM163Q8TC26 289 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 POC1BQ8TC44 478 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 FANK1Q8TC84 345 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 TMEM239Q8WW34 195 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 S100ZQ8WXG8 99 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 CCL17Q92583 94 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 BORCS5Q969J3 196 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 EFHD2Q96C19 240 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 YIPF6Q96EC8 236 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 ZHX1-C8orf76Q96EF9 292 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 LRR1Q96L50 414 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 SIGLEC11Q96RL6 698 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 DDOQ99489 341 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 WFDC6Q9BQY6 131 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NDEL1Q9GZM8 345 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NAA50Q9GZZ1 169 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 HMG20AQ9NP66 347 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 DNAJC27Q9NZQ0 273 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 FLRT3Q9NZU0 649 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 EMC3Q9P0I2 261 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 BAIAP2Q9UQB8 552 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC35A3Q9Y2D2 325 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 NOSIPQ9Y314 301 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 CDH10Q9Y6N8 788 aa6.09□□□□□ -1.43
EXOSC3-206ENST00000489414 IGHV1-69DA0A0B4J2H0 117 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 HTR3EA5X5Y0 456 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 M0R129 80 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 CCRL2O00421 344 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SCDO00767 359 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 LDLRAD4O15165 306 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 PRODHO43272 600 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 CSTAP01040 98 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 IGHV1-69P01742 117 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 DBTP11182 482 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 IFI30P13284 250 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF14P17017 642 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 PAICSP22234 425 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 MPGP29372 298 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 C21orf33P30042 268 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SOX6P35712 828 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ECI1P42126 302 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC15A1P46059 708 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 GPR4P46093 362 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 OMPP47874 163 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 PSPHP78330 225 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 PSG6Q00889 435 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF91Q05481 1191 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 RAB40BQ12829 278 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 IRF3Q14653 427 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF141Q15928 474 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 CTF1Q16619 201 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 TMEM155Q4W5P6 130 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SYT14P1Q58G82 188 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ARMC4Q5T2S8 1044 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 RNLSQ5VYX0 342 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC16A12Q6ZSM3 486 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 GID4Q8IVV7 300 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 IQCF1Q8N6M8 205 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 OR5R1Q8NH85 324 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 TMEM255BQ8WV15 326 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 DNAJA4Q8WW22 397 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms