RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 AKAP1Q92667 903 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 RPL3LQ92901 407 aaKnown RBP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 REEP6Q96HR9 211 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 SOX7Q9BT81 388 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 REPIN1Q9BWE0 567 aaKnown RBP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 BCL2L14Q9BZR8 327 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 FAM192AQ9GZU8 254 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 TXNL4BQ9NX01 149 aaKnown RBP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 N6AMT1Q9Y5N5 214 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 KLF2Q9Y5W3 355 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 V9GYS6 101 aa13.81□□□□□ -0.2
CLDN11-208ENST00000488989 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-208ENST00000488989 hCG_38984A0A1B0GV85 526 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 PYCARD-AS1I3L0S3 204 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 SYT7O43581 403 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 DHRS3O75911 302 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 ATE1O95260 518 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 RAF1P04049 648 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 NR4A1P22736 598 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 NKX6-1P78426 367 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-208ENST00000488989 MALLQ13021 153 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 INSL4Q14641 139 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 FOXB2Q5VYV0 432 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 FBXW12Q6X9E4 464 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 KRT74Q7RTS7 529 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 OR2AE1Q8NHA4 323 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 ISOC1Q96CN7 298 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 C10orf35Q96D05 121 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 DERL3Q96Q80 235 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 CHCHD6Q9BRQ6 235 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 POFUT1Q9H488 388 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 FLNCQ14315 2725 aa13.8□□□□□ -0.2
CLDN11-208ENST00000488989 PIN1P1O15428 100 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 MTRF1O75570 445 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 UCHL1P09936 223 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 OCM2P0CE71 109 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 MAPK3P27361 379 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 PPP1CBP62140 327 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 FAM3AP98173 230 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 TNK1Q13470 666 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 SNTB1Q13884 538 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 GK2Q14410 553 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 OR8B8Q15620 311 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 BEX5Q5H9J7 111 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 ALKBH2Q6NS38 261 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 CEACAM19Q7Z692 300 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 NUP37Q8NFH4 326 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 DGCR14Q96DF8 476 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 OR14A2Q96R54 314 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 CENPOQ9BU64 300 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 ZNF275Q9NSD4 429 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 PTTG3PQ9NZH4 202 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
CLDN11-208ENST00000488989 DHDHQ9UQ10 334 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
CLDN11-208ENST00000488989 TRIM64BA6NI03 449 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 C19orf84I3L1E1 186 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 J3QKU1 62 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 FAM157BP0CG42 384 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 LOXP28300 417 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 GLRXP35754 106 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 MAGEB1P43366 347 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 BSPH1Q075Z2 132 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 SPOCK1Q08629 439 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 C22orf42Q6IC83 251 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 DMRTC2Q8IXT2 367 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 SSC4DQ8WTU2 575 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 TSEN15Q8WW01 171 aaKnown RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 FAM71F1Q96KD3 344 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 PPIL3Q9H2H8 161 aaKnown RBP13.78□□□□□ -0.2
CLDN11-208ENST00000488989 SPEF1Q9Y4P9 236 aa13.78□□□□□ -0.2
CLDN11-208ENST00000488989 LOC100506127A0A0U1RQW1 187 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 H3BMQ9 156 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ABCD4O14678 606 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 SIAH2O43255 324 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 CD2P06729 351 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 RAC2P15153 192 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 FSTP19883 344 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ACKR3P25106 362 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 KIR2DL3P43628 341 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 MAP2K3P46734 347 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 SOX2P48431 317 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 GSK3AP49840 483 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 NCS1P62166 190 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 GFOD2Q3B7J2 385 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ZBTB37Q5TC79 503 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 ASPHD2Q6ICH7 369 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 PGAP1Q75T13 922 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 MRPL21Q7Z2W9 205 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms