RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 LY6G6EA0A0G2JKS1 128 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 A0A1W2PNV4 684 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 TUBAL3A6NHL2 446 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 RFPL4AA6NLU0 287 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 RFPL4AL1F8VTS6 287 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ETV2O00321 342 aaPredicted RBP11.2□□□□□ -0.62
CLIC4-202ENST00000488683 APOC3P02656 99 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PNLIPP16233 465 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 NAGAP17050 411 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PRKACBP22694 351 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 LAP3P28838 519 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 IL13RA1P78552 427 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 FOXRED2Q8IWF2 684 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 UEVLDQ8IX04 471 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 WDSUB1Q8N9V3 476 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 CCDC74BQ96LY2 380 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 GPER1Q99527 375 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 UPB1Q9UBR1 384 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 WIF1Q9Y5W5 379 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 U3KQA8 63 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 NCOR1O75376 2440 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 IGHV5-10-1A0A0J9YXX1 117 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 B8ZZF3 427 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 TRAF3IP2O43734 574 aaPredicted RBP11.2□□□□□ -0.62
CLIC4-202ENST00000488683 CRTAPO75718 401 aaPredicted RBP11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PATE4P0C8F1 98 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PGA4P0DJD7 388 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF20P17024 532 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 SPINK2P20155 84 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 M6PRP20645 277 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 SLC6A9P48067 706 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 CLDN17P56750 224 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF385CQ66K41 422 aaPredicted RBP11.2□□□□□ -0.62
CLIC4-202ENST00000488683 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 CDH26Q8IXH8 852 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ARMC10Q8N2F6 343 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 PTX4Q96A99 478 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 ARHGAP5-AS1Q96IT6 56 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 RAB22AQ9UL26 194 aa11.2□□□□□ -0.62
CLIC4-202ENST00000488683 A0A0A6YYH2 397 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 C5orf51A6NDU8 294 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 A6NJ64 397 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 PATE3B3GLJ2 98 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 RPA2P15927 270 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 RAB6AP20340 208 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 CX3CR1P49238 355 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 MICBQ29980 383 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 GALNTL5Q7Z4T8 443 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 CPEB2Q7Z5Q1 589 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 OR5AS1Q8N127 324 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ST8SIA2Q92186 375 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 RASL10BQ96S79 203 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ELL3Q9HB65 397 aaPredicted RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 DOCK7Q96N67 2140 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 IGKV1-9A0A0C4DH69 117 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 K7ESF4 209 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 RAB3AP20336 220 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 DLSTP36957 453 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 TMEM50BP56557 158 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 DCDP81605 110 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF529Q6P280 563 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 NOXO1Q8NFA2 376 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 OR2AJ1Q8NGZ0 328 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 PIGTQ969N2 578 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF416Q9BWM5 594 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 MBD2Q9UBB5 411 aa11.19□□□□□ -0.62
CLIC4-202ENST00000488683 MRPS28Q9Y2Q9 187 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 MRPS17Q9Y2R5 130 aaKnown RBP11.19□□□□□ -0.62
CLIC4-202ENST00000488683 METTL21EPA6NDL7 271 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 CCDC85CA6NKD9 419 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 ZBTB25P24278 435 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 CALCRP30988 508 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 STARD6P59095 220 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 GMFBP60983 142 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 JMJD6Q6NYC1 403 aaPredicted RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 SLC22A24Q8N4F4 322 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 SPEM1Q8N4L4 309 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 FOXRED1Q96CU9 486 aaPredicted RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 LPAR5Q9H1C0 372 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 B3GALT1Q9Y5Z6 326 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 CCL4P13236 92 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 FAHP16930 419 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF43P17038 809 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 ACY1Q03154 408 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 PDCD1Q15116 288 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms