RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MVKQ03426 396 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 KLHL22Q53GT1 634 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SPRNQ5BIV9 151 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 COMMD2Q86X83 199 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 RORBQ92753 470 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SPSB4Q96A44 273 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SGK3Q96BR1 496 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 LYZL4Q96KX0 146 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 C4orf36Q96KX1 117 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SIGLEC11Q96RL6 698 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF649Q9BS31 505 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 MOB1AQ9H8S9 216 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SP140LQ9H930 580 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 FGF20Q9NP95 211 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 G6PC2Q9NQR9 355 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 MRPS18AQ9NVS2 196 aaKnown RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 NUFIP1Q9UHK0 495 aaKnown RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 PCDHGB1Q9Y5G3 927 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF469Q96JG9 3925 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-210ENST00000488228 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 H3BSH0 61 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 J3QLW9 94 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 MLNRO43193 412 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 SULT1C4O75897 302 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 TTRP02766 147 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ERCC1P07992 297 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 LYNX1P0DP58 116 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 PIPP12273 146 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF19P17023 458 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ACKR3P25106 362 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 DCTDP32321 178 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 KIR3DL2P43630 455 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 GSK3AP49840 483 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ETV1P50549 477 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 MMP16P51512 607 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ACTA2P62736 377 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ACTG2P63267 376 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 CCL8P80075 99 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 FAM3AP98173 230 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 TNK1Q13470 666 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 GALEQ14376 348 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 TESK1Q15569 626 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 CARTPTQ16568 116 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ODF4Q2M2E3 257 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ZMAT1Q5H9K5 638 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 WDR38Q5JTN6 314 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 CATSPERDQ86XM0 798 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 PRSS35Q8N3Z0 413 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 OR8G5Q8NG78 346 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 OR2Z1Q8NG97 314 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 OR51E1Q8TCB6 317 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 SGCDQ92629 289 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 GGHQ92820 318 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ELMOD3Q96FG2 381 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 FAM71F1Q96KD3 344 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 MS4A5Q9H3V2 200 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 OPA3Q9H6K4 179 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 ISG20L2Q9H9L3 353 aaKnown RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 GPR84Q9NQS5 396 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 INPP5EQ9NRR6 644 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 CGGBP1Q9UFW8 167 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 PSORS1C1Q9UIG5 152 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 FBXO9Q9UK97 447 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 OR52A1Q9UKL2 312 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 RAB26Q9ULW5 256 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 DIMT1Q9UNQ2 313 aaKnown RBP9.4□□□□□ -0.9
UBE4B-210ENST00000488228 SLC22A13Q9Y226 551 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
UBE4B-210ENST00000488228 TLN2Q9Y4G6 2542 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 IRGMA1A4Y4 181 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 EFCAB10A6NFE3 127 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 TRIM64A6NGJ6 449 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 TRIM64BA6NI03 449 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 H0YL77 283 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 P2RY10O00398 339 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 TPD52L2O43399 206 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 HLA-DPB1P04440 258 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 DAOP14920 347 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 SELEP16581 610 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CA6P23280 308 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 DCKP27707 260 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 RBMXP38159 391 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 NANOS3P60323 173 aaKnown RBP9.39□□□□□ -0.91
UBE4B-210ENST00000488228 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 OR8B8Q15620 311 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 MOGQ16653 247 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 CLEC12BQ2HXU8 276 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 PCGF3Q3KNV8 242 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 C6orf141Q5SZD1 244 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 OR2G6Q5TZ20 316 aa9.39□□□□□ -0.91
UBE4B-210ENST00000488228 PELI1Q96FA3 418 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms