RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 AICDAQ9GZX7 198 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 LRRN3Q9H3W5 708 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 CLMPQ9H6B4 373 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 METTL7AQ9H8H3 244 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FAM60AQ9NP50 221 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 LHX9Q9NQ69 397 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 PAK1IP1Q9NWT1 392 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GID8Q9NWU2 228 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TAS2R7Q9NYW3 318 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SIGLEC8Q9NYZ4 499 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 EHFQ9NZC4 300 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 DHRS4-AS1Q9P1J3 65 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SEC14L3Q9UDX4 400 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RAB23Q9ULC3 237 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TIMM10BQ9Y5J6 103 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 U3KQA8 63 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 VCANP13611 3396 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 MN1Q10571 1320 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 MDC1Q14676 2089 aaKnown RBP3.15□□□□□ -1.9
PTCD3-216ENST00000487043 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 A0A0A6YYD5 115 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 A0A0J9YWU9 116 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 C4orf51C9J302 202 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 C9JVG2 144 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 CDX4O14627 284 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 MRASO14807 208 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SCAMP2O15127 329 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ERI3O43414 337 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 HCRTR1O43613 425 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TIMM8AO60220 97 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 EEDO75530 441 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SNRNP200O75643 2136 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SCELO95171 688 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SLC2A10O95528 541 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 LDOC1O95751 146 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 HPP00738 406 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 GP1BAP07359 652 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 IL3P08700 152 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 LAMP1P11279 417 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 NQO1P15559 274 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 NELFEP18615 380 aaKnown RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SERPINA2P20848 420 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 HIST1H1TP22492 207 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 S100A3P33764 101 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SSR2P43308 183 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 NUDT2P50583 147 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 IST1P53990 364 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ATP5IP56385 69 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 VSX2P58304 361 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SEC61GP60059 68 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 RAB8AP61006 207 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PSME3P61289 254 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 KCNJ2P63252 427 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 BTN3A2P78410 334 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 CCL7P80098 99 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 C2orf80Q0P641 193 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 RAB40BQ12829 278 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SLAMF1Q13291 335 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 FAM53BQ14153 422 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TIGITQ495A1 244 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PAGE3Q5JUK9 113 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PDZK1Q5T2W1 519 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 CPTPQ5TA50 214 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ANXA8L1Q5VT79 327 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 FAM71E1Q6IPT2 247 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 NANOGP8Q6NSW7 305 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 NIPAL1Q6NVV3 410 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 FAAP20Q6NZ36 180 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PRMT9Q6P2P2 845 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 GUSBP11Q6P575 273 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TRIM40Q6P9F5 258 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ABHD13Q7L211 337 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 HIPK1Q86Z02 1210 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 DEFB107AQ8IZN7 70 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PGAM4Q8N0Y7 254 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 UBE2J2Q8N2K1 259 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 MTURNQ8N3F0 131 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 KIF2BQ8N4N8 673 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 DHRSXQ8N5I4 330 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 KIR3DL3Q8N743 410 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 C15orf54Q8N8G6 183 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ACOT4Q8N9L9 421 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 OR4D9Q8NGE8 314 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 CLHC1Q8NHS4 586 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 GTF2H4Q92759 462 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TCEAL3Q969E4 200 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 MCUR1Q96AQ8 359 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 PPCDCQ96CD2 204 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 LRRC58Q96CX6 371 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TMEM80Q96HE8 168 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 ITCHQ96J02 903 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 CCDC115Q96NT0 180 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 OR52E6Q96RD3 313 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 SLC39A3Q9BRY0 314 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 THTPAQ9BU02 230 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 FAIM2Q9BWQ8 316 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 TRIM15Q9C019 465 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 GLIPR2Q9H4G4 154 aa3.15□□□□□ -1.91
PTCD3-216ENST00000487043 REEP4Q9H6H4 257 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms