RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ITSN2Q9NZM3 1697 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 ARHGAP35Q9NRY4 1499 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 IGHV1OR15-9A0A0B4J2B8 117 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 A0A1B0GTQ1 180 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 A0A1W2PRD5 423 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SYCE1LA8MT33 242 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 H7C1H1 209 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 DNASE2O00115 360 aaPredicted RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 BPY2O14599 106 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 CETN3O15182 167 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 NVLO15381 856 aaKnown RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 WISP3O95389 354 aaPredicted RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 RHOXF2BP0C7M4 288 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 OR56A5P0C7T3 313 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 RALBP11234 206 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PCK1P35558 622 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 NBL1P41271 181 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 CLDN18P56856 261 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF266Q14584 549 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PLCXD3Q63HM9 321 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SNX20Q7Z614 316 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 HORMAD1Q86X24 394 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 H1FOOQ8IZA3 346 aaPredicted RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 OR11H7Q8NGC8 314 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 OR8U1Q8NH10 309 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SUN5Q8TC36 379 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 GPX8Q8TED1 209 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 RGP1Q92546 391 aaPredicted RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 CDKL2Q92772 493 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PEX13Q92968 403 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PTX4Q96A99 478 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SNF8Q96H20 258 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 NARS2Q96I59 477 aaKnown RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 C9orf72Q96LT7 481 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 RNF145Q96MT1 663 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF317Q96PQ6 595 aaPredicted RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 HSD17B10Q99714 261 aaKnown RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 CLSTN2Q9H4D0 955 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PARVGQ9HBI0 331 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PXMP2Q9NR77 195 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 ATPIF1Q9UII2 106 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PYCARDQ9ULZ3 195 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 DDX19BQ9UMR2 479 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 EPRSP07814 1512 aaKnown RBP2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 FAM135AQ9P2D6 1515 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 HECW1Q76N89 1606 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 FHOD3Q2V2M9 1422 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CCDC141Q6ZP82 1450 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CASZ1Q86V15 1759 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 TMEM120BA0PK00 339 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 PDZK1P1A8MUH7 402 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 GABRPO00591 440 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 NME4O00746 187 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RBFOX2O43251 390 aaKnown RBP eCLIP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 AKR7A2O43488 359 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF207O43670 478 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 SHOX2O60902 331 aaPredicted RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 LCA5LO95447 670 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 APCSP02743 223 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 ADRA2AP08913 450 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 USF1P22415 310 aaPredicted RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 PHBP35232 272 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 HSPA9P38646 679 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RBM34P42696 430 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RAB7AP51149 207 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CLDN8P56748 225 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RPS15AP62244 130 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 GNGT1P63211 74 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 SPAG1Q07617 926 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 DGCR6Q14129 220 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 TSC22D1Q15714 1073 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 SNRNP35Q16560 246 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF684Q5T5D7 378 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 PIP5KL1Q5T9C9 394 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF547Q8IVP9 402 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CDKL3Q8IVW4 592 aaPredicted RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 LRRC8AQ8IWT6 810 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 VKORC1L1Q8N0U8 176 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RPEQ96AT9 228 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 FLYWCH2Q96CP2 140 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 BTN2A3PQ96KV6 586 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CEP19Q96LK0 163 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CGREF1Q99674 301 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 SPIN2AQ99865 258 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 SPIN2BQ9BPZ2 258 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 UQCC2Q9BRT2 126 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CALN1Q9BXU9 219 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 API5Q9BZZ5 524 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 CRLF2Q9HC73 371 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 MYOZ1Q9NP98 299 aaPredicted RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 FKBP14Q9NWM8 211 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 RMND1Q9NWS8 449 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 EMC3Q9P0I2 261 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 OPN4Q9UHM6 478 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 C15orf41Q9Y2V0 281 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 YARS2Q9Y2Z4 477 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 FADS3Q9Y5Q0 445 aa2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 BZW2Q9Y6E2 419 aaKnown RBP2.09□□□□□ -2.07
SNRNP27-204ENST00000487029 COMMD3-BMI1R4GMX3 469 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms