RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CDK5R1Q15078 307 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 CCDC58Q4VC31 144 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 ARMCX4Q5H9R4 360 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 DMKNQ6E0U4 476 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 VHLLQ6RSH7 139 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 SLC25A40Q8TBP6 338 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 OR51E1Q8TCB6 317 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 MUL1Q969V5 352 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 MARS2Q96GW9 593 aaKnown RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 MRPS26Q9BYN8 205 aaKnown RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 OR2J1Q9GZK6 312 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 OR10A2Q9H208 303 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 GSX1Q9H4S2 264 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-229ENST00000486665 SP140LQ9H930 580 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 ISYNA1Q9NPH2 558 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 TRIM36Q9NQ86 728 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 RNF115Q9Y4L5 304 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 SPEF1Q9Y4P9 236 aa10.98□□□□□ -0.65
HDAC6-229ENST00000486665 FAM221AA4D161 298 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 H3BSH0 61 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 CTAG2O75638 210 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 ZFPL1O95159 310 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 ATE1O95260 518 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 IGLV3-1P01715 115 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 CELP19835 753 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 PSMB9P28065 219 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 GLRXP35754 106 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 MPV17P39210 176 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 GP2P55259 537 aaKnown RBP10.97□□□□□ -0.65
HDAC6-229ENST00000486665 BDH1Q02338 343 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-229ENST00000486665 TPBGQ13641 420 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 TSTQ16762 297 aaKnown RBP10.97□□□□□ -0.65
HDAC6-229ENST00000486665 TIGD6Q17RP2 521 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 GFOD2Q3B7J2 385 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 TMEM255AQ5JRV8 349 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 SYT6Q5T7P8 510 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-229ENST00000486665 LRP11Q86VZ4 500 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 NUP37Q8NFH4 326 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 OR52H1Q8NGJ2 320 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 OR5L1Q8NGL2 311 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 OR10AC1Q8NH08 325 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 HAVCR2Q8TDQ0 301 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 TMEM171Q8WVE6 324 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 GHSRQ92847 366 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 SPSB4Q96A44 273 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 CMBLQ96DG6 245 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 REEP6Q96HR9 211 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 PDCD1LG2Q9BQ51 273 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 BCL2L14Q9BZR8 327 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 MOB1AQ9H8S9 216 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 GPR84Q9NQS5 396 aa10.97□□□□□ -0.65
HDAC6-229ENST00000486665 A0A0U1RQV5 110 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 PLPP2O43688 288 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 CLPTM1O96005 669 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 TFAP2AP05549 437 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 CPEP16870 476 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 MAGEB1P43366 347 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 FABP6P51161 128 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 TAS2R43P59537 309 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 FAM3AP98173 230 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 MALLQ13021 153 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 GK2Q14410 553 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 SSX1Q16384 188 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF672Q499Z4 452 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 LIPKQ5VXJ0 399 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF544Q6NX49 715 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 TGIF2LYQ8IUE0 185 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 ZNF676Q8N7Q3 588 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 KLF14Q8TD94 323 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 RGP1Q92546 391 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 FCGR1BQ92637 280 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 TMIGD2Q96BF3 282 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 SMIM19Q96E16 107 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 PGLYRP3Q96LB9 341 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 FOXC2Q99958 501 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
HDAC6-229ENST00000486665 CA10Q9NS85 328 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 POU2F3Q9UKI9 436 aa10.96□□□□□ -0.65
HDAC6-229ENST00000486665 CADP27708 2225 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 J3QW42 95 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 XRCC2O43543 280 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 LMX1BO60663 402 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ISG15P05161 165 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 CD1AP06126 327 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ZNF250P15622 560 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 LIPAP38571 399 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ALDH3B2P48448 385 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 PSG7Q13046 419 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 TNK1Q13470 666 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ZNF718Q3SXZ3 478 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 TMEM244Q5VVB8 128 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 OR2T2Q6IF00 324 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms