RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 KHDC3LQ587J8 217 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF343Q6P1L6 599 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 DEFB128Q7Z7B8 93 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ANKRD9Q96BM1 317 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 C8orf44Q96CB5 159 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 KTI12Q96EK9 354 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 SPACA7Q96KW9 195 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 C2orf88Q9BSF0 95 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 LMF2Q9BU23 707 aaKnown RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 LYRM4Q9HD34 91 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 MRPL22Q9NWU5 206 aaKnown RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 HHLA2Q9UM44 414 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 LRP12Q9Y561 859 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 MED19A0JLT2 244 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 RPL36A-HNRNPH2H7BZ11 118 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 MASP2O00187 686 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 LILRB3O75022 631 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 FKTNO75072 461 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 C1QL1O75973 258 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 CAMLGP49069 296 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ROM1Q03395 351 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 SRSF5Q13243 272 aaKnown RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 TCEA2Q15560 299 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ZNHIT3Q15649 155 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 FAM78AQ5JUQ0 283 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 OPN5Q6U736 354 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 NPSR1Q6W5P4 371 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ATG4DQ86TL0 474 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 TGIF2LXQ8IUE1 241 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 LCN9Q8WX39 176 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 RSC1A1Q92681 617 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 ERGIC1Q969X5 290 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 RELTQ969Z4 430 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 NICN1Q9BSH3 213 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 SUCNR1Q9BXA5 334 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 C8orf33Q9H7E9 229 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-208ENST00000486641 EMC9Q9Y3B6 208 aa9.48□□□□□ -0.89
CCDC171-208ENST00000486641 A0A1B0GV50 99 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 LOC107986453A0A1B0GWG9 222 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 CEACAM18A8MTB9 384 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 TCAPO15273 167 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 OR6A2O95222 327 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 C5AR1P21730 350 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 OR52N4Q8NGI2 321 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 GPBAR1Q8TDU6 330 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 Q8WTZ3 238 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 RARRES2Q99969 163 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 ABHD6Q9BV23 337 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 ARID1BQ8NFD5 2236 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 LOC101059948A0A1B0GTJ6 334 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 MANSC4A6NHS7 340 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF724A8MTY0 619 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 C11orf98E9PRG8 122 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 SRSF10O75494 262 aaKnown RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 CEACAM5P06731 702 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 RPS2P15880 293 aaKnown RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 ZP2Q05996 745 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 ELOBQ15370 118 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 PCK2Q16822 640 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 WBP2NLQ6ICG8 309 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 KCTD18Q6PI47 426 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 LILRA6Q6PI73 481 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 PEG10Q86TG7 708 aaKnown RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 NKAIN3Q8N8D7 197 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 KREMEN2Q8NCW0 462 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 TAAR8Q969N4 342 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 TIMM29Q9BSF4 260 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-208ENST00000486641 SRMSQ9H3Y6 488 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 PTGES2Q9H7Z7 377 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 LUZP4Q9P127 313 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 SLC5A6Q9Y289 635 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 MEMO1Q9Y316 297 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 TMED3Q9Y3Q3 217 aa9.47□□□□□ -0.89
CCDC171-208ENST00000486641 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF587BE7ETH6 402 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 PPP1R2P9O14990 202 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 PRKNO60260 465 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-208ENST00000486641 SLC16A7O60669 478 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 DEDDO75618 318 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 EML2O95834 649 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 GUSBP08236 651 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 PNMTP11086 282 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 FABP4P15090 132 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF10P21506 573 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-208ENST00000486641 FPR2P25090 351 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 LMO1P25800 156 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 CHATP28329 748 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 GABRA4P48169 554 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 CCR4P51679 360 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms