RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 AGR3Q8TD06 166 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 TWIST2Q8WVJ9 160 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 DYDC1Q8WWB3 177 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 STARD8Q92502 1023 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 MED8Q96G25 268 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 PPP3R2Q96LZ3 170 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 SH3GL3Q99963 347 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 CENPKQ9BS16 269 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 ELOVL6Q9H5J4 265 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 ZNF385DQ9H6B1 395 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 XKR8Q9H6D3 395 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 WDR76Q9H967 626 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 LYRM4Q9HD34 91 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 SLCO1B3Q9NPD5 702 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 VPS29Q9UBQ0 182 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 RNF11Q9Y3C5 154 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 SPTBN2O15020 2390 aa4.31□□□□□ -1.72
RTN4-214ENST00000486085 A0A0A6YYD5 115 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 GSAPA4D1B5 854 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 TCP11X1B4DZS4 312 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 NVLO15381 856 aaKnown RBP4.3□□□□□ -1.72
RTN4-214ENST00000486085 NSA2O95478 260 aaKnown RBP4.3□□□□□ -1.72
RTN4-214ENST00000486085 CALCBP10092 127 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 PRPS2P11908 318 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 PSMB5P28074 263 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 HMOX2P30519 316 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 OR3A4PP47883 348 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 FOXA1P55317 472 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 GFERP55789 205 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 CCL7P80098 99 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 TGM3Q08188 693 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 ST3GAL3Q11203 375 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 NDUFA9Q16795 377 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 COQ5Q5HYK3 327 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 CBLN3Q6UW01 205 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 ABHD13Q7L211 337 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 PAGE2Q7Z2X7 111 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 ANKRD37Q7Z713 158 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 RIMKLAQ8IXN7 391 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 SNX31Q8N9S9 440 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 LILRB4Q8NHJ6 448 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 C10orf82Q8WW14 230 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 IL1F10Q8WWZ1 152 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 TESCQ96BS2 214 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 MS4A6EQ96DS6 147 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 C19orf60Q96EN9 201 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 AKR1E2Q96JD6 320 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 NOL4LQ96MY1 436 aaPredicted RBP4.3□□□□□ -1.72
RTN4-214ENST00000486085 PRAP1Q96NZ9 151 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 CTRCQ99895 268 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 C19orf24Q9BVV8 132 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 AICDAQ9GZX7 198 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 SPNS1Q9H2V7 528 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 COQ10BQ9H8M1 238 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 WDR54Q9H977 334 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 FAM60AQ9NP50 221 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 LHX9Q9NQ69 397 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 C1orf109Q9NX04 203 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 LYARQ9NX58 379 aaKnown RBP4.3□□□□□ -1.72
RTN4-214ENST00000486085 MS4A12Q9NXJ0 267 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 MRPL39Q9NYK5 338 aaKnown RBP4.3□□□□□ -1.72
RTN4-214ENST00000486085 AHSPQ9NZD4 102 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 USH1CQ9Y6N9 552 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 NCOR2Q9Y618 2525 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 ASPMQ8IZT6 3477 aa4.3□□□□□ -1.72
RTN4-214ENST00000486085 TRAV6A0A075B6T7 132 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 OR6C65A6NJZ3 312 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 H0YGG7 62 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 NDUFS8O00217 210 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 WWP2O00308 870 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PLPP1O14494 284 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 OR1F1O43749 312 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 EFNA2O43921 213 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PEX11AO75192 247 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 SERF1AO75920 110 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PDYNP01213 254 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 IDO1P14902 403 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 HPGDP15428 266 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 ZP3P21754 424 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 HIST1H1TP22492 207 aaPredicted RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 HAAOP46952 286 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PPP1CAP62136 330 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 GNGT1P63211 74 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 C16orf72Q14CZ0 275 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 ATP6AP1LQ52LC2 224 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PVRIGQ6DKI7 326 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 OR5M10Q6IEU7 315 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 TRIM40Q6P9F5 258 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 C6orf89Q6UWU4 347 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 MOB1BQ7L9L4 216 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 SH2D6Q7Z4S9 175 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 ZNF740Q8NDX6 193 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 OR8J2Q8NGG1 315 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 RERGQ96A58 199 aaPredicted RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 TGM7Q96PF1 710 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 BCL7BQ9BQE9 202 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 SLC30A2Q9BRI3 323 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms