RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ACOXLQ9NUZ1 547 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
HDAC6-227ENST00000485102 DNAJB9Q9UBS3 223 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 ENOPH1Q9UHY7 261 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 NOP16Q9Y3C1 178 aaKnown RBP10.8□□□□□ -0.68
HDAC6-227ENST00000485102 AP4S1Q9Y587 144 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 ARRDC5A6NEK1 342 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 PPP1R3DO95685 299 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 HLA-DPB1P04440 258 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 PROK1P58294 105 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 ECH1Q13011 328 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 GK2Q14410 553 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-227ENST00000485102 TAF9Q16594 264 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 FGD3Q5JSP0 725 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 RPL13AP3Q6NVV1 102 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 DPY19L2P2Q6ZN68 376 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 PTCHD4Q6ZW05 846 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 LDLRAD3Q86YD5 345 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 ADGRG5Q8IZF4 528 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 BHLHE23Q8NDY6 225 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 LINC01006Q8NI28 216 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 DMRTB1Q96MA1 342 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 WDFY2Q96P53 400 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 TRIM36Q9NQ86 728 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 ERVK-18Q9QC07 812 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 RNF114Q9Y508 228 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 V9GYQ6 96 aa10.79□□□□□ -0.68
HDAC6-227ENST00000485102 IGLV1-36A0A0B4J1U3 117 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 LGALS8O00214 317 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 TNFRSF11BO00300 401 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 FAM20BO75063 409 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 E2F6O75461 281 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 TOX4O94842 621 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 SFTPBP07988 381 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 ACSM4P0C7M7 580 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 CDKN2AP42771 156 aaKnown RBP10.78□□□□□ -0.68
HDAC6-227ENST00000485102 FXYD6P3P58550 94 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 OTPQ5XKR4 325 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 DNM1P34Q6PK57 102 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
HDAC6-227ENST00000485102 PNLDC1Q8NA58 520 aaKnown RBP10.78□□□□□ -0.68
HDAC6-227ENST00000485102 PCGF1Q9BSM1 259 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF556Q9HAH1 456 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 RNF7Q9UBF6 113 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 B9D1Q9UPM9 204 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
HDAC6-227ENST00000485102 SAMHD1Q9Y3Z3 626 aaKnown RBP10.78□□□□□ -0.68
HDAC6-227ENST00000485102 NOTCH3Q9UM47 2321 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IGHV1-69DA0A0B4J2H0 117 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IGHV3-64DA0A0J9YX35 117 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 SLC22A31A6NKX4 558 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 DCTN6O00399 190 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IMPA2O14732 288 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 ARPC3O15145 178 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 GPR137BO60478 399 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 GMDSO60547 372 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 CCNB2O95067 398 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 ECDO95905 644 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IGHV1-69P01742 117 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IER3P46695 156 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 OMPP47874 163 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 RPS6KA3P51812 740 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 MALLQ13021 153 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 MPPED2Q15777 294 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 RUSC1-AS1Q66K80 236 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 SLC18B1Q6NT16 456 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 ZSCAN4Q8NAM6 433 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-227ENST00000485102 SLC26A10Q8NG04 563 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 TEX12Q9BXU0 123 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 RERGLQ9H628 205 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 C16orf95Q9H693 158 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 WDR76Q9H967 626 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 FN3KRPQ9HA64 309 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 C8orf4Q9NR00 106 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 KAAG1Q9UBP8 84 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 POLR1DQ9Y2S0 133 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 IER3IP1Q9Y5U9 82 aa10.77□□□□□ -0.69
HDAC6-227ENST00000485102 TRAV38-1A0A0B4J264 116 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 H0YHG0 523 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 SOCS2O14508 198 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 OR10H3O60404 316 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 ANXA8P13928 327 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 KPNB1Q14974 876 aaKnown RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 ATP6AP1Q15904 470 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 SLC36A3Q495N2 470 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 CORO6Q6QEF8 472 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 GDPGP1Q6ZNW5 385 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 PGAP1Q75T13 922 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 ZBTB46Q86UZ6 589 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 ZDHHC13Q8IUH4 622 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 OR6V1Q8N148 313 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 FAM86B1Q8N7N1 296 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 SPERTQ8NA61 448 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 GNPDA2Q8TDQ7 276 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms