RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MAD2L1BPQ15013 274 aaPredicted RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 METTL21CQ5VZV1 264 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 SLC30A8Q8IWU4 369 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 METTL13Q8N6R0 699 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 OR10Z1Q8NGY1 313 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 HAUS1Q96CS2 278 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 FAM210BQ96KR6 192 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 TAAR1Q96RJ0 339 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 C1orf198Q9H425 327 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 EDA2RQ9HAV5 297 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 TREX1Q9NSU2 369 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 IL17CQ9P0M4 197 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 MRM2Q9UI43 246 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 NXT1Q9UKK6 140 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 NOSIPQ9Y314 301 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 PCDH11XQ9BZA7 1347 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 BRCA1P38398 1863 aaKnown RBP3.09□□□□□ -1.92
VPS13A-211ENST00000484581 IGHV3-64DA0A0J9YX35 117 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 NKX2-6A6NCS4 301 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 GOLGA8JA6NMD2 632 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 INS-IGF2F8WCM5 200 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 RAD1O60671 282 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 SEMA3DO95025 777 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 GABARAPO95166 117 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 PTHP01270 115 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 GOLGA8HP0CJ92 632 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF17P17021 662 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 HTR1DP28221 377 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 UBE2AP49459 152 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 WNT4P56705 351 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 MLF1P58340 268 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 C2orf54Q08AI8 447 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 IFFO1Q0D2I5 559 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 C2orf80Q0P641 193 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ERCC8Q13216 396 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 DYNC1I2Q13409 638 aaKnown RBP3.08□□□□□ -1.92
VPS13A-211ENST00000484581 SYCP1Q15431 976 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 OR1Q1Q15612 314 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 RSPO1Q2MKA7 263 aaPredicted RBP3.08□□□□□ -1.92
VPS13A-211ENST00000484581 HSP90B2PQ58FF3 399 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 AVPI1Q5T686 147 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 DNAJC24Q6P3W2 148 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 PRSS58Q8IYP2 241 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 CA13Q8N1Q1 262 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ABHD3Q8WU67 409 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 FAM19A4Q96LR4 140 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 SPNS1Q9H2V7 528 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 RRAGDQ9NQL2 400 aaPredicted RBP3.08□□□□□ -1.92
VPS13A-211ENST00000484581 FBXO8Q9NRD0 319 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ENPP5Q9UJA9 477 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 CFL2Q9Y281 166 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ACOT9Q9Y305 439 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 ARHGAP21Q5T5U3 1957 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 PALLDQ8WX93 1383 aa3.08□□□□□ -1.92
VPS13A-211ENST00000484581 TDRD6O60522 2096 aaKnown RBP3.07□□□□□ -1.92
VPS13A-211ENST00000484581 IGHV1-69DA0A0B4J2H0 117 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 F8VP50 259 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF593O00488 134 aaPredicted RBP3.07□□□□□ -1.92
VPS13A-211ENST00000484581 UPK1BO75841 260 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 IGKV3-15P01624 115 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 OR5AL1P0C617 328 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 RANBP1P43487 201 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 PRLHRP49683 370 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 NDUFA8P51970 172 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF136P52737 540 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CACNG7P62955 275 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ARG2P78540 354 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CAPRIN1Q14444 709 aaKnown RBP3.07□□□□□ -1.92
VPS13A-211ENST00000484581 IRF4Q15306 451 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ORMDL2Q53FV1 153 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ACTL10Q5JWF8 245 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF470Q6ECI4 717 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 SSX6Q7RTT6 188 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ZNF429Q86V71 674 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ERO1BQ86YB8 467 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CDRT4Q8N9R6 151 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 UBAC2Q8NBM4 344 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 TMEM158Q8WZ71 300 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 PHYHIPLQ96FC7 376 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 RDH12Q96NR8 316 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CIB1Q99828 191 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 HDHD3Q9BSH5 251 aaPredicted RBP3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CHAC1Q9BUX1 264 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 TOLLIPQ9H0E2 274 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 PORCNQ9H237 461 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 ARV1Q9H2C2 271 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 C6orf50Q9HD87 102 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 SDHAF2Q9NX18 166 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 STX18Q9P2W9 335 aaKnown RBP3.07□□□□□ -1.92
VPS13A-211ENST00000484581 CARMIL3Q8ND23 1372 aa3.07□□□□□ -1.92
VPS13A-211ENST00000484581 IGLV11-55A0A075B6I3 123 aa3.06□□□□□ -1.92
VPS13A-211ENST00000484581 IGHV2OR16-5A0A0B4J2B6 119 aa3.06□□□□□ -1.92
VPS13A-211ENST00000484581 A6NDX4 124 aa3.06□□□□□ -1.92
VPS13A-211ENST00000484581 LINC01619G3V211 115 aa3.06□□□□□ -1.92
VPS13A-211ENST00000484581 M0R1B8 84 aa3.06□□□□□ -1.92
VPS13A-211ENST00000484581 DNASE2O00115 360 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms